RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 FLOT2Q14254 428 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 DACH2Q96NX9 599 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 ARHGEF38Q9NXL2 777 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 PYGLP06737 847 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 SPRP35270 261 aaPredicted RBP18.19■□□□□ 0.5
UBFD1-201ENST00000395878 USP10Q14694 798 aaKnown RBP18.19■□□□□ 0.5
UBFD1-201ENST00000395878 PDK1Q15118 436 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 ATF7IP2Q5U623 682 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 RFX8Q6ZV50 586 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 PTPRN2Q92932 1015 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 IQCA1LA6NCM1 817 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 KLK7P49862 253 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 RUBCNLQ9H714 662 aa18.19■□□□□ 0.5
UBFD1-201ENST00000395878 PRMT7Q9NVM4 692 aaPredicted RBP18.19■□□□□ 0.5
UBFD1-201ENST00000395878 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SNRPAP09012 282 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 HMOX2P30519 316 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CACNB2Q08289 660 aaPredicted RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 PDAP1Q13442 181 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SEC16BQ96JE7 1060 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 ZIM3Q96PE6 472 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SMARCAL1Q9NZC9 954 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 TLR2O60603 784 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 LSP1P33241 339 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CARSP49589 748 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SCFD2Q8WU76 684 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CNOT7Q9UIV1 285 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CHMP2BQ9UQN3 213 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 KLHL2O95198 593 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 THEMIS2Q5TEJ8 643 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 IER5Q5VY09 327 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 OR2W6PQ8NHA6 318 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SPATA18Q8TC71 538 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 DCUN1D1Q96GG9 259 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 GGT7Q9UJ14 662 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 MTO1Q9Y2Z2 717 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 RARBP10826 455 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 GPD1P21695 349 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 ITGA8P53708 1063 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SYCP2LQ5T4T6 812 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CAPRIN2Q6IMN6 1127 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 LONP2Q86WA8 852 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 CATSPER3Q86XQ3 398 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 FRMD8Q9BZ67 464 aaPredicted RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 PCMTD2Q9NV79 361 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 SLC38A7Q9NVC3 462 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 TSR3Q9UJK0 312 aaKnown RBP18.18■□□□□ 0.5
UBFD1-201ENST00000395878 AURKCQ9UQB9 309 aa18.18■□□□□ 0.5
UBFD1-201ENST00000395878 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 WEE2P0C1S8 567 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 GPAT2Q6NUI2 795 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 PRUNE1Q86TP1 453 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 FEZF2Q8TBJ5 459 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 HNRNPLLQ8WVV9 542 aaKnown RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 MRPL1Q9BYD6 325 aaKnown RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 CARD9Q9H257 536 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 C17orf75Q9HAS0 396 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 MYO3AQ8NEV4 1616 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 TMEM120BA0PK00 339 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 KYNUQ16719 465 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 NYAP1Q6ZVC0 841 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 KDELC2Q7Z4H8 507 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 POLR1AO95602 1720 aaPredicted RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 SLC25A27O95847 323 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 SV2CQ496J9 727 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 CST8O60676 142 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 CYBBP04839 570 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 COILP38432 576 aaPredicted RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 C3orf62Q6ZUJ4 267 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 NOA1Q8NC60 698 aaKnown RBP18.17■□□□□ 0.5
UBFD1-201ENST00000395878 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
UBFD1-201ENST00000395878 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 POLBP06746 335 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 PPP4CP60510 307 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 TROAPQ12815 778 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 C16orf89Q6UX73 402 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 TRPM8Q7Z2W7 1104 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 CHST13Q8NET6 341 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ELMO2Q96JJ3 720 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ADAM33Q9BZ11 813 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 TASP1Q9H6P5 420 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 PIDD1Q9HB75 910 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 HIST1H2AGP0C0S8 130 aaPredicted RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 MYL2P10916 166 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 HIST1H2ADP20671 130 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 FNTAP49354 379 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 TTC39BQ5VTQ0 682 aaPredicted RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 HIST1H2AHQ96KK5 128 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 HIST1H2AJQ99878 128 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 H2AFJQ9BTM1 129 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms