RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 MAN1A2O60476 641 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 CAPN1P07384 714 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 ALADP13716 330 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 TUBA1BP68363 451 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 TUBA1AQ71U36 451 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 ZFPM1Q8IX07 1006 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 CAPSLQ8WWF8 208 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 VPS50Q96JG6 964 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 LRGUKQ96M69 825 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 HACD3Q9P035 362 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 AFPP02771 609 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 EEF1DP29692 281 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 SKIV2L2P42285 1042 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 RPL5P46777 297 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 OCRLQ01968 901 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 ZC2HC1CQ53FD0 456 aaPredicted RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 SLC2A7Q6PXP3 512 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 ZNF384Q8TF68 577 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 APPL1Q9UKG1 709 aa11.96□□□□□ -0.5
RAPGEF3-202ENST00000395358 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 PLEKHA8P1O95397 391 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MRPS15P82914 257 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 KDSRQ06136 332 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 GRM4Q14833 912 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CNGA2Q16280 664 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MDH1BQ5I0G3 518 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 NLRP9Q7RTR0 991 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MTMR14Q8NCE2 650 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MAML1Q92585 1016 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MTMR8Q96EF0 704 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CNBD2Q96M20 576 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 SLC39A3Q9BRY0 314 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 RRAGCQ9HB90 399 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 BCAP29Q9UHQ4 241 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 PHTF1Q9UMS5 762 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MRPL11Q9Y3B7 192 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 EIF3FO00303 357 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CYTH3O43739 400 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CNOT3O75175 753 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CFBP00751 764 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CAP2P40123 477 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 C21orf59P57076 290 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 TMEM63BQ5T3F8 832 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 MTDHQ86UE4 582 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 OMA1Q96E52 524 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 COX4I2Q96KJ9 171 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 LRMDAQ9H2I8 198 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 COQ6Q9Y2Z9 468 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 HEY1Q9Y5J3 304 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 N6AMT1Q9Y5N5 214 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 RREB1Q92766 1687 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 COL1A1P02452 1464 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 I3L4J1 428 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 CD97P48960 835 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 WASHC5Q12768 1159 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 PIK3AP1Q6ZUJ8 805 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 LPCAT2Q7L5N7 544 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 PIGSQ96S52 555 aa11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 TRIM56Q9BRZ2 755 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-202ENST00000395358 H3BRJ5 948 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 ALAS1P13196 640 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 FLT3P36888 993 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 DTHD1Q6ZMT9 781 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 DHTKD1Q96HY7 919 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 PSTPIP2Q9H939 334 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 DDX28Q9NUL7 540 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 TMEM221A6NGB7 291 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 ENO1P06733 434 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 KRT5P13647 590 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 KLRC1P26715 233 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 ZNF280AP59817 542 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
RAPGEF3-202ENST00000395358 SLC25A41Q8N5S1 370 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms