RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 C2CD2LO14523 706 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 RB1P06400 928 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 GTF2H1P32780 548 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 ENPEPQ07075 957 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 GRIN2CQ14957 1233 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 SPOPLQ6IQ16 392 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 Q7L0L9 218 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 SPPL3Q8TCT6 385 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 SEMA4DQ92854 862 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 ZNF560Q96MR9 790 aa23.15■■□□□ 1.3
VDAC1-203ENST00000395047 TIMM13Q9Y5L4 95 aaPredicted RBP23.15■■□□□ 1.3
VDAC1-203ENST00000395047 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.15■■□□□ 1.3
VDAC1-203ENST00000395047 SF3B1O75533 1304 aaKnown RBP eCLIP23.14■■□□□ 1.32e-6■■■■■ 58.3
VDAC1-203ENST00000395047 ATG2AQ2TAZ0 1938 aa23.14■■□□□ 1.3
VDAC1-203ENST00000395047 H3BNC9 293 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 MYO1EQ12965 1108 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 MIIPQ5JXC2 388 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 GAS2L3Q86XJ1 694 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 VPS52Q8N1B4 723 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 AUTS2Q8WXX7 1259 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 CRACR2AQ9BSW2 395 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 NXF1Q9UBU9 619 aaKnown RBP23.14■■□□□ 1.29
VDAC1-203ENST00000395047 SNX9Q9Y5X1 595 aa23.14■■□□□ 1.29
VDAC1-203ENST00000395047 KPNA7A9QM74 516 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 TMEM189-UBE2V1I3L0A0 370 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 MCCD1P59942 119 aaPredicted RBP23.13■■□□□ 1.29
VDAC1-203ENST00000395047 TPM4P67936 248 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 PLCB3Q01970 1234 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 ZNF699Q32M78 642 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 WDR72Q3MJ13 1102 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 SV2CQ496J9 727 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 VWA3BQ502W6 1294 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 FBXL13Q8NEE6 735 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 ANKRD20A12PQ8NF67 263 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 NDST4Q9H3R1 872 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 PUF60Q9UHX1 559 aaKnown RBP23.13■■□□□ 1.29
VDAC1-203ENST00000395047 PCDHGC5Q9Y5F6 944 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 TKTP29401 623 aaKnown RBP23.13■■□□□ 1.29
VDAC1-203ENST00000395047 LRMPQ12912 555 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 DDX53Q86TM3 631 aaKnown RBP23.13■■□□□ 1.29
VDAC1-203ENST00000395047 LRRC52Q8N7C0 313 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 MICAL1Q8TDZ2 1067 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 SENP8Q96LD8 212 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 RAB20Q9NX57 234 aa23.13■■□□□ 1.29
VDAC1-203ENST00000395047 TRAPPC3O43617 180 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 PNPLA4P41247 253 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 ERVFC1P60507 584 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 KIAA1841Q6NSI8 718 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 MMS19Q96T76 1030 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 XYLT2Q9H1B5 865 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 POLIQ9UNA4 740 aa23.12■■□□□ 1.29
VDAC1-203ENST00000395047 CARNS1A5YM72 827 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 CYB561D2O14569 222 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 COPB1P53618 953 aaKnown RBP23.11■■□□□ 1.29
VDAC1-203ENST00000395047 SCARA5Q6ZMJ2 495 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 TMC7Q7Z402 723 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 TCF25Q9BQ70 676 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 ENTPD7Q9NQZ7 604 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 LIMA1Q9UHB6 759 aaKnown RBP23.11■■□□□ 1.29
VDAC1-203ENST00000395047 N4BP1O75113 896 aaKnown RBP23.11■■□□□ 1.29
VDAC1-203ENST00000395047 SOD2P04179 222 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 TPM2P07951 284 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 IRS1P35568 1242 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 SGSM1Q2NKQ1 1148 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 RTP2Q5QGT7 225 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 PLPP4Q5VZY2 271 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 SUSD3Q96L08 255 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 IMPG2Q9BZV3 1241 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 RBSNQ9H1K0 784 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 TLR9Q9NR96 1032 aa23.11■■□□□ 1.29
VDAC1-203ENST00000395047 SERPINC1P01008 464 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 CETN1Q12798 172 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 CAMK1Q14012 370 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 USP41Q3LFD5 358 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 ANP32EQ9BTT0 268 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 GCNT4Q9P109 453 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 TSC2P49815 1807 aa23.1■■□□□ 1.29
VDAC1-203ENST00000395047 LPXNO60711 386 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 AARSP49588 968 aaKnown RBP eCLIP23.09■■□□□ 1.298e-6■■■■■ 52.4
VDAC1-203ENST00000395047 FXR1P51114 621 aaKnown RBP eCLIP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 TNNC1P63316 161 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 NOP14P78316 857 aaKnown RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 PTPN21Q16825 1174 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 ZNF667Q5HYK9 610 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 PRSS55Q6UWB4 352 aaPredicted RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 GLYCTKQ8IVS8 523 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 CCDC150Q8NCX0 1101 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 RIN2Q8WYP3 895 aaPredicted RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 TTPALQ9BTX7 342 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 APOBEC3GQ9HC16 384 aaKnown RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 TMEM265A0A087WTH1 108 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 EFEMP2O95967 443 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 ASS1P00966 412 aaKnown RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 ATICP31939 592 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 RAP1GAPP47736 663 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 APBA1Q02410 837 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 ELAVL2Q12926 359 aaKnown RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 WDR44Q5JSH3 913 aa23.09■■□□□ 1.29
VDAC1-203ENST00000395047 RNF168Q8IYW5 571 aaPredicted RBP23.09■■□□□ 1.29
VDAC1-203ENST00000395047 TATDN2Q93075 761 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms