RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 APBB1IPQ7Z5R6 666 aaPredicted RBP17.33■□□□□ 0.36
SNCA-205ENST00000394991 TMC8Q8IU68 726 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 TMEM130Q8N3G9 435 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 CSGALNACT1Q8TDX6 532 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 DDX12PQ92771 950 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 MSANTD3Q96H12 275 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 CNTN3Q9P232 1028 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
SNCA-205ENST00000394991 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
SNCA-205ENST00000394991 ZNF638Q14966 1978 aaKnown RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 K7ERI5 159 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 CHADO15335 359 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 CTHP32929 405 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 MCM4P33991 863 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 FCHO2Q0JRZ9 810 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 SF3A2Q15428 464 aaKnown RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 STXBP5Q5T5C0 1151 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 N4BP2L1Q5TBK1 243 aaPredicted RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 GPIHBP1Q8IV16 184 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 BEST2Q8NFU1 509 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 LRRC3BQ96PB8 259 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 TARS2Q9BW92 718 aaKnown RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 DNAJC25Q9H1X3 360 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 CRISPLD1Q9H336 500 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 C8orf33Q9H7E9 229 aaPredicted RBP17.32■□□□□ 0.36
SNCA-205ENST00000394991 RXFP3Q9NSD7 469 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 ANGPTL2Q9UKU9 493 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 FRYQ5TBA9 3013 aa17.32■□□□□ 0.36
SNCA-205ENST00000394991 A0A1W2PRU2 124 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 MYBPHLA2RUH7 354 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 TM4SF5O14894 197 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 JAK2O60674 1132 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 CPB1P15086 417 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 PROZP22891 400 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 RPL9P32969 192 aaKnown RBP17.31■□□□□ 0.36
SNCA-205ENST00000394991 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
SNCA-205ENST00000394991 LIMK1P53667 647 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 CCDC6Q16204 474 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 CEP68Q76N32 757 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 WDR5BQ86VZ2 330 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 YAF2Q8IY57 180 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 TTC8Q8TAM2 541 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 ZFYVE19Q96K21 471 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 GPR88Q9GZN0 384 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 BHMT2Q9H2M3 363 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 MAFFQ9ULX9 164 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
SNCA-205ENST00000394991 FOXD2O60548 495 aaPredicted RBP17.3■□□□□ 0.36
SNCA-205ENST00000394991 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
SNCA-205ENST00000394991 OR4Q2P0C623 313 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 MCF2P10911 925 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 HOXA6P31267 233 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 NPTX2P47972 431 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 PEX3P56589 373 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 PON2Q15165 354 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 ME3Q16798 604 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 AASDHQ4L235 1098 aaPredicted RBP17.3■□□□□ 0.36
SNCA-205ENST00000394991 DGKKQ5KSL6 1271 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 IL31Q6EBC2 164 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 C1orf228Q6PIY5 440 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 DAW1Q8N136 415 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 DDX1Q92499 740 aaKnown RBP17.3■□□□□ 0.36
SNCA-205ENST00000394991 GTF3C6Q969F1 213 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 E2F7Q96AV8 911 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 ACAP3Q96P50 834 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 PGLYRP2Q96PD5 576 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
SNCA-205ENST00000394991 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 ARHGAP28Q9P2N2 729 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 OBSL1O75147 1896 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 MYO16Q9Y6X6 1858 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 ATRXP46100 2492 aa17.3■□□□□ 0.36
SNCA-205ENST00000394991 IGF2RP11717 2491 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 KIAA1549LQ6ZVL6 1849 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 CCDC169A6NNP5 214 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 AXIN1O15169 862 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
SNCA-205ENST00000394991 SHC2P98077 582 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 CCINQ13939 588 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 PKN3Q6P5Z2 889 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 MPZL3Q6UWV2 235 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 RALGPS2Q86X27 583 aaPredicted RBP17.29■□□□□ 0.36
SNCA-205ENST00000394991 ARID3BQ8IVW6 561 aaPredicted RBP17.29■□□□□ 0.36
SNCA-205ENST00000394991 APPL2Q8NEU8 664 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
SNCA-205ENST00000394991 ARRDC1-AS1Q9H2J1 176 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 TMEM134Q9H6X4 195 aa17.29■□□□□ 0.36
SNCA-205ENST00000394991 EXTL3O43909 919 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 EPN2O95208 641 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 MUTP22033 750 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms