RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RFX6Q8HWS3 928 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 NIM1KQ8IY84 436 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ST13P4Q8IZP2 240 aaPredicted RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 STK32AQ8WU08 396 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CFAP57Q96MR6 1250 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MIS12Q9H081 205 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 RNPEPL1Q9HAU8 725 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 NMRK1Q9NWW6 199 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 APEX2Q9UBZ4 518 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 SERPINB13Q9UIV8 391 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 ABCB11O95342 1321 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MYL2P10916 166 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ALAS1P13196 640 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ASPHQ12797 758 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PRKG1Q13976 671 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 DHX34Q14147 1143 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 GEN1Q17RS7 908 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MMEL1Q495T6 779 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 KHDC1Q4VXA5 237 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 FIGNQ5HY92 759 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 GALNT17Q6IS24 598 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CROCCP2Q86T23 111 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ARHGEF19Q8IW93 802 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MAP7D3Q8IWC1 876 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 RHOT2Q8IXI1 618 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MAIP1Q8WWC4 291 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 P3H4Q92791 437 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MTBPQ96DY7 904 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CNBD2Q96M20 576 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 SYT15Q9BQS2 421 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 FAM213AQ9BRX8 229 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TSSK1BQ9BXA7 367 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 LARSQ9P2J5 1176 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 ANKRD12Q6UB98 2062 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 WDR64B1ANS9 1081 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CALB2P22676 271 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ITIH4Q14624 930 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 C11orf63Q6NUN7 778 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 HACE1Q8IYU2 909 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ZSWIM1Q9BR11 485 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 LZTS2Q9BRK4 669 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 DENND2DQ9H6A0 471 aaPredicted RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 SBF1O95248 1867 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CCDC189A1A4V9 331 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 GRAP2O75791 330 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TTLL1O95922 423 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 EIF2AK2P19525 551 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 GSTT1P30711 240 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PEX5P50542 639 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PCNX4Q63HM2 1172 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 C3orf62Q6ZUJ4 267 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 IRF2BP2Q7Z5L9 587 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PTAR1Q7Z6K3 402 aaPredicted RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 CDR2LQ86X02 465 aaPredicted RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 MSL3Q8N5Y2 521 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 CXorf38Q8TB03 319 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 GRK7Q8WTQ7 553 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 ZNF512BQ96KM6 892 aaPredicted RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 COG5Q9UP83 839 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TRAF3IP3Q9Y228 551 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 LTBP3Q9NS15 1303 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 LRRIQ4A6NIV6 560 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 IRF6O14896 467 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 RRM1P23921 792 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 VHLP40337 213 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 NRLP54845 237 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 RRP1BQ14684 758 aaKnown RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 PPP2R5EQ16537 467 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 PLA2G4FQ68DD2 849 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 C6orf89Q6UWU4 347 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PODNQ7Z5L7 613 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PRPF39Q86UA1 669 aaKnown RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.3□□□□□ -0.922e-32■□□□□ 11.2
RTN4-206ENST00000394611 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 SLC35C1Q96A29 364 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 CARD9Q9H257 536 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PNMA6FA0A0J9YX94 578 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PJA2O43164 708 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 PECAM1P16284 738 aaPredicted RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 ACOT2P49753 483 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 MMP14P50281 582 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 VAMP7P51809 220 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 NPEPPSP55786 919 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 RPS6P62753 249 aaKnown RBP9.3□□□□□ -0.92
RTN4-206ENST00000394611 PDE1BQ01064 536 aa9.3□□□□□ -0.92
RTN4-206ENST00000394611 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms