RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 ZNF668Q96K58 619 aaPredicted RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 FGFR1OP2Q9NVK5 253 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 GGA2Q9UJY4 613 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 NUB1Q9Y5A7 615 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 PIAS1O75925 651 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 ITGBL1O95965 494 aaPredicted RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 IREB2P48200 963 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 LIG4P49917 911 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 DRP2Q13474 957 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 MON1BQ7L1V2 547 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 IWS1Q96ST2 819 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 NTPCRQ9BSD7 190 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 C10orf88Q9H8K7 445 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.116e-9■□□□□ 10.2
GTF2F1-201ENST00000394456 NINJ2Q9NZG7 142 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.11
GTF2F1-201ENST00000394456 SOWAHBA6NEL2 793 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 TCP11X1B4DZS4 312 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 DGAT1O75907 488 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 C4BPAP04003 597 aaKnown RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 MTM1Q13496 603 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 SLMAPQ14BN4 828 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 ZNF394Q53GI3 561 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 PIGWQ7Z7B1 504 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 CENPTQ96BT3 561 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 THOC1Q96FV9 657 aaKnown RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 ATP6V0A4Q9HBG4 840 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 LRRIQ4A6NIV6 560 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 STAM2O75886 525 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 CYP4F22Q6NT55 531 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 CYB5D1Q6P9G0 228 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 RIOX2Q8IUF8 465 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 DNERQ8NFT8 737 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 MRRFQ96E11 262 aaKnown RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 ARHGAP28Q9P2N2 729 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
GTF2F1-201ENST00000394456 PGK2P07205 417 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 POLGP54098 1239 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 GCNT1Q02742 428 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 MAMLD1Q13495 774 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 ZACNQ401N2 412 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 TAB3Q8N5C8 712 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 SNF8Q96H20 258 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 FNBP1Q96RU3 617 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 ANAPC5Q9UJX4 755 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 AGO2Q9UKV8 859 aaKnown RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 TPX2Q9ULW0 747 aaKnown RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 A0A0G2JLL6 359 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 DKC1O60832 514 aaKnown RBP eCLIP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 BANF1O75531 89 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 CYP1A1P04798 512 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 TNFSF9P41273 254 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 KLF1Q13351 362 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 FASTKD3Q14CZ7 662 aaKnown RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 EMC2Q15006 297 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 PRRT2Q7Z6L0 340 aaPredicted RBP14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 SYT17Q9BSW7 474 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 TXNRD2Q9NNW7 524 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
GTF2F1-201ENST00000394456 THAP12O43422 761 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 PROSCO94903 275 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 TTC4O95801 387 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 CST3P01034 146 aaPredicted RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 ATF2P15336 505 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 GLRA2P23416 452 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 NOMO3P69849 1222 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 PTK6Q13882 451 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 CLUL1Q15846 466 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 TMEM63BQ5T3F8 832 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 C3orf20Q8ND61 904 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 TMEM109Q9BVC6 243 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 WHRNQ9P202 907 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 GNA15P30679 374 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 MCCD1P59942 119 aaPredicted RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 SNRPFP62306 86 aaKnown RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 ZNF252P-AS1Q0IIN9 211 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms