RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SYCE1Q8N0S2 351 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 MSANTD4Q8NCY6 345 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 TFAP2BQ92481 460 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 KIF12Q96FN5 646 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 APOL6Q9BWW8 343 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 SMYD3Q9H7B4 428 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 PIN4Q9Y237 131 aaKnown RBP20.35■□□□□ 0.85
CLDND1-203ENST00000394181 ALG6Q9Y672 507 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 ADAMTS4O75173 837 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 TCEAL1Q15170 157 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 DCAF4L1Q3SXM0 396 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 NOTUMQ6P988 496 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 CD99L2Q8TCZ2 262 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 TRIM7Q9C029 511 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 RNF39Q9H2S5 420 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 XPNPEP3Q9NQH7 507 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
CLDND1-203ENST00000394181 DPP3Q9NY33 737 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 CNOT8Q9UFF9 292 aaKnown RBP20.35■□□□□ 0.85
CLDND1-203ENST00000394181 AMFRQ9UKV5 643 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 SEC31AO94979 1220 aaKnown RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 HADHBP55084 474 aaKnown RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 MESDQ14696 234 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 GLRA4Q5JXX5 417 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 TAF4BQ92750 862 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 CCDC94Q9BW85 323 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 HMGXB4Q9UGU5 601 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 GTF2IRD1Q9UHL9 959 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 GTF3C4Q9UKN8 822 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 PPEF2O14830 753 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 DDX3YO15523 660 aaKnown RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 ZMYND10O75800 440 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 GNAT1P11488 350 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 RRM1P23921 792 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 CRYBB1P53674 252 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 POU5F1Q01860 360 aaKnown RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 KYAT1Q16773 422 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 CFAP221Q4G0U5 840 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 FAM47CQ5HY64 1035 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF667Q5HYK9 610 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 DCAF12L1Q5VU92 463 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF564Q8TBZ8 553 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 HDAC7Q8WUI4 952 aa20.34■□□□□ 0.85
CLDND1-203ENST00000394181 C18orf25Q96B23 403 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-203ENST00000394181 CEP104O60308 925 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 ASGR1P07306 291 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 PAFAH1B1P43034 410 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 VSNL1P62760 191 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 NOMO3P69849 1222 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 HTRA3P83110 453 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 CENPCQ03188 943 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 KCNA10Q16322 511 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 UBXN11Q5T124 520 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 HPDLQ96IR7 371 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 RPGRIP1Q96KN7 1286 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 TWNKQ96RR1 684 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 BCO2Q9BYV7 579 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 OSBPL7Q9BZF2 842 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 KLK14Q9P0G3 267 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 NOC2LQ9Y3T9 749 aaKnown RBP20.33■□□□□ 0.85
CLDND1-203ENST00000394181 C2CD2Q9Y426 696 aa20.33■□□□□ 0.85
CLDND1-203ENST00000394181 GRIN2DO15399 1336 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 KPNA6O60684 536 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 MON1BQ7L1V2 547 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 SNX27Q96L92 541 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 LRRC1Q9BTT6 524 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 TUBGCP4Q9UGJ1 667 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 RECQL4O94761 1208 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 MTA2O94776 668 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 COMTP21964 271 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 NSFP46459 744 aaKnown RBP20.32■□□□□ 0.84
CLDND1-203ENST00000394181 MARCKSL1P49006 195 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 NME8Q8N427 588 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 WHAMMQ8TF30 809 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 ALG3Q92685 438 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 KRT35Q92764 455 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 C11orf70Q9BRQ4 267 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 CELF4Q9BZC1 486 aaKnown RBP20.32■□□□□ 0.84
CLDND1-203ENST00000394181 TRIM6Q9C030 488 aaPredicted RBP20.32■□□□□ 0.84
CLDND1-203ENST00000394181 SPC25Q9HBM1 224 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 CREBZFQ9NS37 354 aa20.32■□□□□ 0.84
CLDND1-203ENST00000394181 CTSHP09668 335 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 KCTD19Q17RG1 926 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-203ENST00000394181 ALKAL1Q6UXT8 129 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 MMS22LQ6ZRQ5 1243 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 FAM228AQ86W67 206 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 MMGT1Q8N4V1 131 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 WDTC1Q8N5D0 677 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 RAB21Q9UL25 225 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 GJB6O95452 261 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 TUBB4BP68371 445 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 PTP4A2Q12974 167 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 CCSAPQ6IQ19 270 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-203ENST00000394181 C11orf63Q6NUN7 778 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 PBKQ96KB5 322 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 CDY2AQ9Y6F7 541 aa20.31■□□□□ 0.84
CLDND1-203ENST00000394181 RAD23BP54727 409 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 NKX3-2P78367 333 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms