RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 ROR1Q01973 937 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 THOC5Q13769 683 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CBWD6Q4V339 395 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CBWD3Q5JTY5 395 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CBWD5Q5RIA9 395 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 SPATA20Q8TB22 786 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 STMN2Q93045 179 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 TINF2Q9BSI4 451 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 TLK1Q9UKI8 766 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 USP2O75604 605 aaPredicted RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 EGFRP00533 1210 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GZMAP12544 262 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PORCNQ9H237 461 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CARD9Q9H257 536 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 H3BRJ5 948 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 LGALS2P05162 132 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GSTA1P08263 222 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GSTA2P09210 222 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PNPLA4P41247 253 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CD302Q8IX05 232 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 SNF8Q96H20 258 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GOLGA7BQ2TAP0 167 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 IQSEC1Q6DN90 963 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 SRRM1Q8IYB3 904 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 GDAP1Q8TB36 358 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CELF4Q9BZC1 486 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 CNOT10Q9H9A5 744 aaKnown RBP11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 L2HGDHQ9H9P8 463 aa11.23□□□□□ -0.61
MTHFD2-201ENST00000394053 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 GPR182O15218 404 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SUN1O94901 812 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 YY1P25490 414 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 PCSK9Q8NBP7 692 aaKnown RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SKA2Q8WVK7 121 aaPredicted RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 RASA4BC9J798 803 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 APOL1O14791 398 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 RASA4O43374 803 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 RAD51CO43502 376 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 CST8O60676 142 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 KRT37O76014 449 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 APOEP02649 317 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SULT1E1P49888 294 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 IRX4P78413 519 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 IFT88Q13099 833 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 PDCLQ13371 301 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 SYCP2LQ5T4T6 812 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 MCUQ8NE86 351 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 RASSF4Q9H2L5 321 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 PHF2O75151 1096 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 AKR1A1P14550 325 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 MAGOHP61326 146 aaKnown RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 BEX3Q00994 111 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 UGCGQ16739 394 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 TTC31Q49AM3 519 aaPredicted RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 NXNQ6DKJ4 435 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 DLK2Q6UY11 383 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 ANO5Q75V66 913 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 DEPDC1BQ8WUY9 529 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 MTMR8Q96EF0 704 aa11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 METTL5Q9NRN9 209 aaKnown RBP11.22□□□□□ -0.61
MTHFD2-201ENST00000394053 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 TRPA1O75762 1119 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 CIB2O75838 187 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 CARSP49589 748 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms