RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 WDR81Q562E7 1941 aa10.3□□□□□ -0.76
PC-201ENST00000393955 RGS16O15492 202 aaPredicted RBP10.3□□□□□ -0.76
PC-201ENST00000393955 COMTP21964 271 aa10.3□□□□□ -0.76
PC-201ENST00000393955 ADSSP30520 456 aa10.3□□□□□ -0.76
PC-201ENST00000393955 PTGER2P43116 358 aa10.3□□□□□ -0.76
PC-201ENST00000393955 WNT7BP56706 349 aa10.3□□□□□ -0.76
PC-201ENST00000393955 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
PC-201ENST00000393955 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
PC-201ENST00000393955 C1orf131Q8NDD1 294 aaKnown RBP10.3□□□□□ -0.76
PC-201ENST00000393955 ASAP3Q8TDY4 903 aa10.3□□□□□ -0.76
PC-201ENST00000393955 KAT2BQ92831 832 aa10.3□□□□□ -0.76
PC-201ENST00000393955 FERMT1Q9BQL6 677 aa10.3□□□□□ -0.76
PC-201ENST00000393955 GCOM2Q9BZD3 368 aaPredicted RBP10.3□□□□□ -0.76
PC-201ENST00000393955 TXNDC16Q9P2K2 825 aa10.3□□□□□ -0.76
PC-201ENST00000393955 TIMM13Q9Y5L4 95 aaPredicted RBP10.3□□□□□ -0.76
PC-201ENST00000393955 BTNL10A8MVZ5 291 aa10.3□□□□□ -0.76
PC-201ENST00000393955 EIF3DO15371 548 aaKnown RBP eCLIP10.3□□□□□ -0.76
PC-201ENST00000393955 KCNA3P22001 575 aa10.3□□□□□ -0.76
PC-201ENST00000393955 LAMTOR4Q0VGL1 99 aa10.3□□□□□ -0.76
PC-201ENST00000393955 DRP2Q13474 957 aa10.3□□□□□ -0.76
PC-201ENST00000393955 ZKSCAN8Q15776 578 aaPredicted RBP10.3□□□□□ -0.76
PC-201ENST00000393955 KCNT1Q5JUK3 1230 aa10.3□□□□□ -0.76
PC-201ENST00000393955 RSPH3Q86UC2 560 aa10.3□□□□□ -0.76
PC-201ENST00000393955 RAET1EQ8TD07 263 aa10.3□□□□□ -0.76
PC-201ENST00000393955 BCAS4Q8TDM0 211 aa10.3□□□□□ -0.76
PC-201ENST00000393955 RFFLQ8WZ73 363 aa10.3□□□□□ -0.76
PC-201ENST00000393955 CYFIP2Q96F07 1278 aa10.3□□□□□ -0.76
PC-201ENST00000393955 MCEEQ96PE7 176 aa10.3□□□□□ -0.76
PC-201ENST00000393955 ALG6Q9Y672 507 aa10.3□□□□□ -0.76
PC-201ENST00000393955 EIF3HO15372 352 aaKnown RBP eCLIP10.3□□□□□ -0.76
PC-201ENST00000393955 MAFGO15525 162 aa10.3□□□□□ -0.76
PC-201ENST00000393955 B4GALT5O43286 388 aa10.3□□□□□ -0.76
PC-201ENST00000393955 PPFIA4O75335 1185 aa10.3□□□□□ -0.76
PC-201ENST00000393955 PGK1P00558 417 aa10.3□□□□□ -0.76
PC-201ENST00000393955 SHBGP04278 402 aa10.3□□□□□ -0.76
PC-201ENST00000393955 CHRNB2P17787 502 aa10.3□□□□□ -0.76
PC-201ENST00000393955 YY1P25490 414 aa10.3□□□□□ -0.76
PC-201ENST00000393955 NME3Q13232 169 aa10.3□□□□□ -0.76
PC-201ENST00000393955 TRIM7Q9C029 511 aa10.3□□□□□ -0.76
PC-201ENST00000393955 FAM169AQ9Y6X4 670 aa10.3□□□□□ -0.76
PC-201ENST00000393955 SLC16A3O15427 465 aaKnown RBP10.29□□□□□ -0.76
PC-201ENST00000393955 ZNF862O60290 1169 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TNFSF9P41273 254 aa10.29□□□□□ -0.76
PC-201ENST00000393955 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
PC-201ENST00000393955 ITKQ08881 620 aa10.29□□□□□ -0.76
PC-201ENST00000393955 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
PC-201ENST00000393955 DNAJB3Q8WWF6 145 aa10.29□□□□□ -0.76
PC-201ENST00000393955 ATG4AQ8WYN0 398 aa10.29□□□□□ -0.76
PC-201ENST00000393955 UPF1Q92900 1129 aaKnown RBP eCLIP10.29□□□□□ -0.761e-6■■■■■ 29.1
PC-201ENST00000393955 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
PC-201ENST00000393955 KREMEN1Q96MU8 473 aa10.29□□□□□ -0.76
PC-201ENST00000393955 MRPL47Q9HD33 250 aaKnown RBP10.29□□□□□ -0.76
PC-201ENST00000393955 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.29□□□□□ -0.76
PC-201ENST00000393955 FOXO6A8MYZ6 492 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TBC1D12O60347 775 aa10.29□□□□□ -0.76
PC-201ENST00000393955 NPM3O75607 178 aaKnown RBP10.29□□□□□ -0.76
PC-201ENST00000393955 GTF2A2P52657 109 aa10.29□□□□□ -0.76
PC-201ENST00000393955 YWHAGP61981 247 aaKnown RBP eCLIP10.29□□□□□ -0.76
PC-201ENST00000393955 ZNF844Q08AG5 666 aa10.29□□□□□ -0.76
PC-201ENST00000393955 BBS9Q3SYG4 887 aa10.29□□□□□ -0.76
PC-201ENST00000393955 CCDC38Q502W7 563 aa10.29□□□□□ -0.76
PC-201ENST00000393955 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TTC27Q6P3X3 843 aa10.29□□□□□ -0.76
PC-201ENST00000393955 METTL7BQ6UX53 244 aa10.29□□□□□ -0.76
PC-201ENST00000393955 RHOT2Q8IXI1 618 aa10.29□□□□□ -0.76
PC-201ENST00000393955 RASGEF1CQ8N431 466 aa10.29□□□□□ -0.76
PC-201ENST00000393955 EMC1Q8N766 993 aa10.29□□□□□ -0.76
PC-201ENST00000393955 BSNDQ8WZ55 320 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TAF1DQ9H5J8 278 aaPredicted RBP10.29□□□□□ -0.76
PC-201ENST00000393955 FBXL5Q9UKA1 691 aa10.29□□□□□ -0.76
PC-201ENST00000393955 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
PC-201ENST00000393955 PSME4Q14997 1843 aa10.29□□□□□ -0.76
PC-201ENST00000393955 CCDC78A2IDD5 438 aa10.29□□□□□ -0.76
PC-201ENST00000393955 HBP1O60381 514 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TRPA1O75762 1119 aa10.29□□□□□ -0.76
PC-201ENST00000393955 ECEL1O95672 775 aa10.29□□□□□ -0.76
PC-201ENST00000393955 MXD4Q14582 209 aaPredicted RBP10.29□□□□□ -0.76
PC-201ENST00000393955 PLEKHH3Q7Z736 793 aa10.29□□□□□ -0.76
PC-201ENST00000393955 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■■■□ 19.5
PC-201ENST00000393955 HERPUD2Q9BSE4 406 aa10.29□□□□□ -0.76
PC-201ENST00000393955 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
PC-201ENST00000393955 KIAA1586Q9HCI6 787 aa10.29□□□□□ -0.76
PC-201ENST00000393955 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
PC-201ENST00000393955 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
PC-201ENST00000393955 A6NJR5 290 aa10.28□□□□□ -0.76
PC-201ENST00000393955 PHF20L1A8MW92 1017 aa10.28□□□□□ -0.76
PC-201ENST00000393955 CREB3O43889 395 aa10.28□□□□□ -0.76
PC-201ENST00000393955 MOCS2O96007 188 aaPredicted RBP10.28□□□□□ -0.76
PC-201ENST00000393955 EFNA5P52803 228 aa10.28□□□□□ -0.76
PC-201ENST00000393955 SARNPP82979 210 aaKnown RBP10.28□□□□□ -0.76
PC-201ENST00000393955 ZBTB41Q5SVQ8 909 aa10.28□□□□□ -0.76
PC-201ENST00000393955 DARS2Q6PI48 645 aaKnown RBP10.28□□□□□ -0.76
PC-201ENST00000393955 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
PC-201ENST00000393955 NOP9Q86U38 636 aaKnown RBP10.28□□□□□ -0.76
PC-201ENST00000393955 PALM2Q8IXS6 379 aa10.28□□□□□ -0.76
PC-201ENST00000393955 C18orf8Q96DM3 657 aa10.28□□□□□ -0.76
PC-201ENST00000393955 ISCUQ9H1K1 167 aa10.28□□□□□ -0.76
PC-201ENST00000393955 PRG3Q9Y2Y8 225 aaPredicted RBP10.28□□□□□ -0.76
PC-201ENST00000393955 WDR91A4D1P6 747 aa10.28□□□□□ -0.76
PC-201ENST00000393955 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms