RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 VRTNQ9H8Y1 702 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 PLEKHA5Q9HAU0 1116 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CHORDC1Q9UHD1 332 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-203ENST00000393578 MIF4GDA9UHW6 222 aaKnown RBP23.68■■□□□ 1.38
HMGA2-203ENST00000393578 DDX3YO15523 660 aaKnown RBP23.68■■□□□ 1.38
HMGA2-203ENST00000393578 NPTXRO95502 500 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 WEE2P0C1S8 567 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 AXLP30530 894 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 NOMO3P69849 1222 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 ZNF200P98182 395 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-203ENST00000393578 RASGEF1CQ8N431 466 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 BCO2Q9BYV7 579 aa23.68■■□□□ 1.38
HMGA2-203ENST00000393578 NXF1Q9UBU9 619 aaKnown RBP23.68■■□□□ 1.38
HMGA2-203ENST00000393578 WDR72Q3MJ13 1102 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 GLE1Q53GS7 698 aaKnown RBP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 GNASQ5JWF2 1037 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 RUBCNQ92622 972 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 VCPIP1Q96JH7 1222 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 TMEM59LQ9UK28 342 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 ITGA11Q9UKX5 1188 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 MYADML2A6NDP7 307 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 PGRMC1O00264 195 aaKnown RBP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 ATP8B1O43520 1251 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 CFHP08603 1231 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 MESDQ14696 234 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 SNX17Q15036 470 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 SCARA5Q6ZMJ2 495 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 MON1BQ7L1V2 547 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 MTG1Q9BT17 334 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 LRRC1Q9BTT6 524 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 UPF3AQ9H1J1 476 aaKnown RBP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 CARD9Q9H257 536 aa23.67■■□□□ 1.38
HMGA2-203ENST00000393578 TTC7AQ9ULT0 858 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-203ENST00000393578 SEC31AO94979 1220 aaKnown RBP23.66■■□□□ 1.38
HMGA2-203ENST00000393578 RNASE9P60153 205 aaKnown RBP23.66■■□□□ 1.38
HMGA2-203ENST00000393578 PHF13Q86YI8 300 aaPredicted RBP23.66■■□□□ 1.38
HMGA2-203ENST00000393578 SPC25Q9HBM1 224 aa23.66■■□□□ 1.38
HMGA2-203ENST00000393578 POLIQ9UNA4 740 aa23.66■■□□□ 1.38
HMGA2-203ENST00000393578 DERAQ9Y315 318 aa23.66■■□□□ 1.38
HMGA2-203ENST00000393578 PCNTO95613 3336 aa23.66■■□□□ 1.38
HMGA2-203ENST00000393578 LSM8O95777 96 aaKnown RBP23.65■■□□□ 1.38
HMGA2-203ENST00000393578 CRYBB1P53674 252 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-203ENST00000393578 PRKCZQ05513 592 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 PASD1Q8IV76 773 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 UBL4BQ8N7F7 174 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 DPP3Q9NY33 737 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 CITO14578 2027 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 SEPT4O43236 478 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 P4HA1P13674 534 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 COMTP21964 271 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 NKX3-2P78367 333 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 RBP5P82980 135 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 LONRF2Q1L5Z9 754 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 LIN9Q5TKA1 542 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 TAF2Q6P1X5 1199 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 REM2Q8IYK8 340 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-203ENST00000393578 TMEM40Q8WWA1 233 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 KIF12Q96FN5 646 aa23.65■■□□□ 1.38
HMGA2-203ENST00000393578 EIF2AQ9BY44 585 aaKnown RBP23.65■■□□□ 1.38
HMGA2-203ENST00000393578 NOC2LQ9Y3T9 749 aaKnown RBP23.65■■□□□ 1.38
HMGA2-203ENST00000393578 TRIP12Q14669 1992 aaPredicted RBP23.64■■□□□ 1.38
HMGA2-203ENST00000393578 TMEM110-MUSTN1A8MSY1 372 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 STAU1O95793 577 aaKnown RBP23.64■■□□□ 1.38
HMGA2-203ENST00000393578 RRM1P23921 792 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 POLR2BP30876 1174 aaKnown RBP23.64■■□□□ 1.38
HMGA2-203ENST00000393578 C1QBPQ07021 282 aaKnown RBP23.64■■□□□ 1.38
HMGA2-203ENST00000393578 ZNF394Q53GI3 561 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 BEND6Q5SZJ8 279 aaPredicted RBP23.64■■□□□ 1.38
HMGA2-203ENST00000393578 C8orf74Q6P047 294 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 HPDLQ96IR7 371 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 WNT8AQ9H1J5 351 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 CYP3A43Q9HB55 503 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 SNTG2Q9NY99 539 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 ADAM22Q9P0K1 906 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 AGAP1Q9UPQ3 857 aa23.64■■□□□ 1.38
HMGA2-203ENST00000393578 RARBP10826 455 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 YARSP54577 528 aaKnown RBP23.63■■□□□ 1.37
HMGA2-203ENST00000393578 TNNC1P63316 161 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 DCAF12L1Q5VU92 463 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 SNX27Q96L92 541 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 ZNF518BQ9C0D4 1074 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 PCDHGC3Q9UN70 934 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 CLUL1Q15846 466 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 CD101Q93033 1021 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 ZSWIM1Q9BR11 485 aa23.63■■□□□ 1.37
HMGA2-203ENST00000393578 TRIM6Q9C030 488 aaPredicted RBP23.63■■□□□ 1.37
HMGA2-203ENST00000393578 FAM124BQ9H5Z6 455 aaPredicted RBP23.63■■□□□ 1.37
HMGA2-203ENST00000393578 AOC2O75106 756 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 TOMM70O94826 608 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 PGK1P00558 417 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 PAEPP09466 180 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 BRD2P25440 801 aaKnown RBP23.62■■□□□ 1.37
HMGA2-203ENST00000393578 CACNB2Q08289 660 aaPredicted RBP23.62■■□□□ 1.37
HMGA2-203ENST00000393578 TMEM130Q8N3G9 435 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 HDAC7Q8WUI4 952 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 ALG3Q92685 438 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 BTBD6Q96KE9 485 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 C11orf70Q9BRQ4 267 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 STIM2Q9P246 746 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms