RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SV2CQ496J9 727 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 ZCWPW2Q504Y3 356 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 ANKRD54Q6NXT1 300 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 PALB2Q86YC2 1186 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 GLYCTKQ8IVS8 523 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 TRIML1Q8N9V2 468 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 OR5B17Q8NGF7 314 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 MSLNLQ96KJ4 702 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 SENP8Q96LD8 212 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 POP1Q99575 1024 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 DZANK1Q9NVP4 752 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 MTRRQ9UBK8 725 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 DPP7Q9UHL4 492 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 VWA8A3KMH1 1905 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 CETN3O15182 167 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 MAPK13O15264 365 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 SPTLC1O15269 473 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 GLUD1P00367 558 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 ODC1P11926 461 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 PSMC2P35998 433 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 MRPL58Q14197 206 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 CLUL1Q15846 466 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 ANKRD40Q6AI12 368 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 ELMSAN1Q6PJG2 1045 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 TRAPPC11Q7Z392 1133 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 USP37Q86T82 979 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 LRRC52Q8N7C0 313 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 PARD3BQ8TEW8 1205 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 NUP62CLQ9H1M0 184 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 PTPRJQ12913 1337 aa20.49■□□□□ 0.87
PDLIM7-204ENST00000393546 SCN1AP35498 2009 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 SPDYE4A6NLX3 237 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 KPNA7A9QM74 516 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 CYB561D2O14569 222 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 TYMPP19971 482 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 BMP6P22004 513 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 CCNE1P24864 410 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 OR1D2P34982 312 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 AP3M2P53677 418 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 LRRC63Q05C16 580 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 FAM186BQ8IYM0 893 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 TMC2Q8TDI7 906 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 FAM84AQ96KN4 292 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 SIX4Q9UIU6 781 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 FAM50BQ9Y247 325 aa20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 TIMM13Q9Y5L4 95 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-204ENST00000393546 PPP1R3GB7ZBB8 358 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 TGM5O43548 720 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 AKAP3O75969 853 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 KRT13P13646 458 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 CD44P16070 742 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 KCNQ1P51787 676 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 FKBP3Q00688 224 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 YWHAHQ04917 246 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 BFSP1Q12934 665 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 MYO1EQ12965 1108 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 RAB33AQ14088 237 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 CTXN3Q4LDR2 81 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 TJAP1Q5JTD0 557 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 PTCRAQ6ISU1 281 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 KLHL10Q6JEL2 608 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 ZNF280DQ6N043 979 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 LILRA6Q6PI73 481 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 INTS8Q75QN2 995 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 METTL23Q86XA0 190 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 CXorf38Q8TB03 319 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 PLEKHO2Q8TD55 490 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 HDAC7Q8WUI4 952 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 ZNF516Q92618 1163 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 BORCS6Q96GS4 357 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 OXCT2Q9BYC2 517 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 GZF1Q9H116 711 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 PLEKHA4Q9H4M7 779 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 DSEQ9UL01 958 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 CDY1Q9Y6F8 540 aa20.47■□□□□ 0.87
PDLIM7-204ENST00000393546 LRRIQ3A6PVS8 624 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 ADAM12O43184 909 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 PHACTR2O75167 634 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 OAZ2O95190 189 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 SPATA31D3P0C874 917 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 VAMP7P51809 220 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 CLDN10P78369 228 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 SMAD4Q13485 552 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 TRPC3Q13507 836 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 SYCE2Q6PIF2 218 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 RSPO2Q6UXX9 243 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 SPATA31D4Q6ZUB0 917 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 GPT2Q8TD30 523 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 NELFBQ8WX92 580 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 MKNK1Q9BUB5 465 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 MAN1C1Q9NR34 630 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 FBXL5Q9UKA1 691 aa20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-204ENST00000393546 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 GRXCR2A6NFK2 248 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 IKBKBO14920 756 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 MBTPS2O43462 519 aa20.45■□□□□ 0.86
PDLIM7-204ENST00000393546 TBC1D4O60343 1298 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms