RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 USP37Q86T82 979 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 TDRD5Q8NAT2 981 aaKnown RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 SLC39A2Q9NP94 309 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 DSEQ9UL01 958 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 MAFFQ9ULX9 164 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 GOLGA8IPA6NC78 632 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 GOLGA8JA6NMD2 632 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 PI4K2BG5E9Z4 385 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 ADAM12O43184 909 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 TBC1D4O60343 1298 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 XYLBO75191 536 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 OAZ2O95190 189 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 RPN1P04843 607 aaKnown RBP13.7□□□□□ -0.22
GGPS1-203ENST00000391855 C8AP07357 584 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 HOXD13P35453 343 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 LILRA4P59901 499 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 ROR1Q01973 937 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 SV2CQ496J9 727 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 PPM1LQ5SGD2 360 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 XXYLT1Q8NBI6 393 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-203ENST00000391855 GOLPH3LQ9H4A5 285 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 WDR6Q9NNW5 1121 aaKnown RBP13.7□□□□□ -0.22
GGPS1-203ENST00000391855 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 ITGA11Q9UKX5 1188 aa13.7□□□□□ -0.22
GGPS1-203ENST00000391855 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 OR6C75A6NL08 312 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 CLUHO75153 1309 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 RFPL2O75678 378 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 ELF1P32519 619 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 DPYDQ12882 1025 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 STK4Q13043 487 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 KCNB1Q14721 858 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 ZDHHC14Q8IZN3 488 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 KIAA0895Q8NCT3 520 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 NOC3LQ8WTT2 800 aaKnown RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 TMEM174Q8WUU8 243 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 ZNF707Q96C28 371 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 SENP8Q96LD8 212 aa13.69□□□□□ -0.22
GGPS1-203ENST00000391855 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
GGPS1-203ENST00000391855 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 PPEF2O14830 753 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 ABLIM3O94929 683 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 TNNC2P02585 160 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 CYP11A1P05108 521 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 WEE2P0C1S8 567 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 CPB1P15086 417 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 ATF2P15336 505 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 FAM160A1Q05DH4 1040 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 RSPO2Q6UXX9 243 aaPredicted RBP13.68□□□□□ -0.22
GGPS1-203ENST00000391855 SPATA31D4Q6ZUB0 917 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 METTL23Q86XA0 190 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 CBWD2Q8IUF1 395 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 SLC7A14Q8TBB6 771 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 PDE11AQ9HCR9 933 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 AFF4Q9UHB7 1163 aaKnown RBP13.68□□□□□ -0.22
GGPS1-203ENST00000391855 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
GGPS1-203ENST00000391855 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
GGPS1-203ENST00000391855 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 PDXKO00764 312 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 CYP2J2P51589 502 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 RBP5P82980 135 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 PSMD6Q15008 389 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 TCEAL8Q8IYN2 117 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 FMR1NBQ8N0W7 255 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-203ENST00000391855 C1orf127Q8N9H9 656 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 ZSWIM2Q8NEG5 633 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 SPATA18Q8TC71 538 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 FNBP1Q96RU3 617 aa13.67□□□□□ -0.22
GGPS1-203ENST00000391855 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
GGPS1-203ENST00000391855 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms