RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CTTNBP2NLQ9P2B4 639 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 KCNG1Q9UIX4 513 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 AJAP1Q9UKB5 411 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PROCRQ9UNN8 238 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PCDHB1Q9Y5F3 818 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 CYP2D7A0A087X1C5 515 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 SMIM22K7EJ46 135 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 SOCS2O14508 198 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 SUN1O94901 812 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 ALPLP05186 524 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 RHOP08100 348 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 EBLN1P0CF75 366 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 NR2F6P10588 404 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 KCNA2P16389 499 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 PLCD1P51178 756 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 PER3P56645 1201 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 CCT2P78371 535 aaKnown RBP2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 CDK17Q00537 523 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 MC2RQ01718 297 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 DYRK1AQ13627 763 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 FHL3Q13643 280 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 PDCD1Q15116 288 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 Q4G0T1 1027 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 ZNF628Q5EBL2 1059 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 BROXQ5VW32 411 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 ADGRG5Q8IZF4 528 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 GALNT16Q8N428 558 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 NANOGP1Q8N7R0 232 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 LRIG1Q96JA1 1093 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 DPP7Q9UHL4 492 aa2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 RUVBL1Q9Y265 456 aaKnown RBP2.21□□□□□ -2.06
RNU6-239P-201ENST00000390990 ZBTB7CA1YPR0 619 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 MYO1FO00160 1098 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 GTPBP1O00178 669 aaKnown RBP2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 ZNF213O14771 459 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 ADAMTS3O15072 1205 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 JTBO76095 146 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 ALAS1P13196 640 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 JUPP14923 745 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 SLC6A4P31645 630 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 NEK4P51957 841 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 NXPH1P58417 271 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 ITIH3Q06033 890 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 PPP3CAQ08209 521 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 SQSTM1Q13501 440 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 ERV3-1Q14264 604 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 TRIP6Q15654 476 aaKnown RBP2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 UGT8Q16880 541 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 CEP85Q6P2H3 762 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 CATSPERGQ6ZRH7 1159 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 CNGA4Q8IV77 575 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 B3GALNT2Q8NCR0 500 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 NSUN7Q8NE18 718 aaKnown RBP2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 TSPEARQ8WU66 669 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 VCPIP1Q96JH7 1222 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 PBKQ96KB5 322 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 PDGFCQ9NRA1 345 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 LANCL2Q9NS86 450 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 SERTAD4Q9NUC0 356 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 DKK3Q9UBP4 350 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 SCOCQ9UIL1 159 aa2.2□□□□□ -2.06
RNU6-239P-201ENST00000390990 PRSS44E7EML9 344 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 KIAA0391O15091 583 aaKnown RBP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 DNAJB5O75953 348 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 POU3F2P20265 443 aaPredicted RBP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 MT3P25713 68 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 PCSK6P29122 969 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 SLC6A9P48067 706 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 PABPC4Q13310 644 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 PCBP1Q15365 356 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 ADRM1Q16186 407 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 TMPRSS9Q7Z410 1059 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 FBXO41Q8TF61 875 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 SSH1Q8WYL5 1049 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 SNX19Q92543 992 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 ZC3H10Q96K80 434 aaKnown RBP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 CTAGE1Q96RT6 745 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 DMRT3Q9NQL9 472 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 TRNAU1APQ9NX07 287 aaKnown RBP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 MAGEC2Q9UBF1 373 aaPredicted RBP2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 CDYLQ9Y232 598 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 NR2E3Q9Y5X4 410 aa2.19□□□□□ -2.06
RNU6-239P-201ENST00000390990 TCF20Q9UGU0 1960 aaKnown RBP2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 FAM90A10PA6NDY2 464 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 KRT86O43790 486 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 RAB11FIP3O75154 756 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 BCAR3O75815 825 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 AGFG2O95081 481 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 GAS8-AS1O95177 125 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 AMY1AP04745 511 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 FAM163BP0C2L3 166 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 ZFXP17010 805 aaPredicted RBP2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 ATP2B1P20020 1258 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 ADCYAP1R1P41586 468 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 LSSP48449 732 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 ANXA11P50995 505 aaKnown RBP2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 MTM1Q13496 603 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 KRT81Q14533 505 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 SEPT2Q15019 361 aa2.18□□□□□ -2.06
RNU6-239P-201ENST00000390990 FSCN1Q16658 493 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms