RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ACAD11Q709F0 780 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 ZFPM1Q8IX07 1006 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 COA7Q96BR5 231 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 C9orf72Q96LT7 481 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 TYW1Q9NV66 732 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 ANKFY1Q9P2R3 1169 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 KIAA1024Q9UPX6 916 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 GAKO14976 1311 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 TMEM221A6NGB7 291 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 PDXKO00764 312 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 DLATP10515 647 aaKnown RBP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 PGM1P36871 562 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 SULT2A1Q06520 285 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 PTK6Q13882 451 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 P3H1Q32P28 736 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 TMEM259Q4ZIN3 620 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CFAP157Q5JU67 520 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CPNE8Q86YQ8 564 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 IRGQQ8WZA9 623 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 PPP1R14BQ96C90 147 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 KIAA1586Q9HCI6 787 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CALUO43852 315 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 SORBS3O60504 671 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 FTLP02792 175 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 TROVE2P10155 538 aaKnown RBP eCLIP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 RARBP10826 455 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CETN2P41208 172 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 TRIP13Q15645 432 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 MAPK6Q16659 721 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 RFX8Q6ZV50 586 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 RELL1Q8IUW5 271 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 KSR1Q8IVT5 923 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 HAS1Q92839 578 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 GJA10Q969M2 543 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CATSPER2Q96P56 530 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 EPB41L1Q9H4G0 881 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 EBF3Q9H4W6 596 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 CLIC5Q9NZA1 410 aa15.5■□□□□ 0.07
VPS9D1-201ENST00000389386 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 RBM47A0AV96 593 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SLC16A3O15427 465 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 OPHN1O60890 802 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 NR3C1P04150 777 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 DPEP1P16444 411 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 CA4P22748 312 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 OLFML2BQ68BL8 750 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SYDE1Q6ZW31 735 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SATL1Q86VE3 508 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 C4orf33Q8N1A6 199 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 MORC4Q8TE76 937 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 PRR11Q96HE9 360 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 ZNF287Q9HBT7 754 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 PTTG2Q9NZH5 202 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 ESYT2A0FGR8 921 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 FSCN2O14926 492 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 CLDN3O15551 220 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 DNAJC6O75061 913 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 OR6B1O95007 311 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SLC16A2P36021 539 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 GPC5P78333 572 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 MPP3Q13368 585 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 ITGA9Q13797 1035 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 GRM2Q14416 872 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 KRT72Q14CN4 511 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 LLGL1Q15334 1064 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SGO2Q562F6 1265 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 DUS1LQ6P1R4 473 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 KLC3Q6P597 504 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 CCDC174Q6PII3 467 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 CLMNQ96JQ2 1002 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 TTC25Q96NG3 672 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 SMC6Q96SB8 1091 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 NDUFA13Q9P0J0 144 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 CHORDC1Q9UHD1 332 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 ADAMTSL1Q8N6G6 1762 aa15.49■□□□□ 0.07
VPS9D1-201ENST00000389386 TYROBPO43914 113 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ABHD2P08910 425 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ESRRAP11474 423 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ATF2P15336 505 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 CBX3Q13185 183 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 TSHZ1Q6ZSZ6 1077 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ZBTB8BQ8NAP8 495 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 MKL1Q969V6 931 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 DGCR14Q96DF8 476 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 DNAJC1Q96KC8 554 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 AGPAT1Q99943 283 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 NDE1Q9NXR1 346 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 DNAJB4Q9UDY4 337 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 GAS8O95995 478 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 KRT18P05783 430 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ADCY8P40145 1251 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms