RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SLFN11Q7Z7L1 901 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 UBA3Q8TBC4 463 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 RAB6CQ9H0N0 254 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 TUBGCP4Q9UGJ1 667 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 CYTH4Q9UIA0 394 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 XIRP2A4UGR9 3374 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 MROH7Q68CQ1 1323 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 EYSQ5T1H1 3165 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 PI4K2BG5E9Z4 385 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 GOLGA8SH3BPF8 625 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 ASPAP45381 313 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 FLT3LGP49771 235 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 TXNRD3NBQ6F5E7 133 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 CCNI2Q6ZMN8 369 aaPredicted RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 MCOLN2Q8IZK6 566 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 ATG4AQ8WYN0 398 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 TRIB2Q92519 343 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 NEUROG2Q9H2A3 272 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 SLC15A5A6NIM6 579 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 GRAP2O75791 330 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 PRLRP16471 622 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 NSFP46459 744 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 SLC26A2P50443 739 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 PRKCZQ05513 592 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 SMC1AQ14683 1233 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 MFSD10Q14728 455 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 IQSEC1Q6DN90 963 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
LTN1-203ENST00000389195 WDR49Q8IV35 697 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 ABRAQ8N0Z2 381 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 LINC01465Q8N7H1 131 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 TSEN2Q8NCE0 465 aaKnown RBP10.84□□□□□ -0.67
LTN1-203ENST00000389195 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 CCDC102AQ96A19 550 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 SELENOOQ9BVL4 669 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 IMPG2Q9BZV3 1241 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
LTN1-203ENST00000389195 TULP2O00295 520 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 GPR32O75388 356 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 OAS2P29728 719 aaKnown RBP10.83□□□□□ -0.68
LTN1-203ENST00000389195 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
LTN1-203ENST00000389195 ZFYVE27Q5T4F4 411 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 DENND1BQ6P3S1 775 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 EMC1Q8N766 993 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 LRRC4CQ9HCJ2 640 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 TNFSF13BQ9Y275 285 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 SLC45A1Q9Y2W3 748 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 A6NJR5 290 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 TAS2R40P59535 323 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 ADCY2Q08462 1091 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 TUBB2AQ13885 445 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 TRIP13Q15645 432 aaPredicted RBP10.83□□□□□ -0.68
LTN1-203ENST00000389195 C1orf54Q8WWF1 131 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 TUBB2BQ9BVA1 445 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 C2orf40Q9H1Z8 148 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 ADAMTS10Q9H324 1103 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 STIM2Q9P246 746 aa10.83□□□□□ -0.68
LTN1-203ENST00000389195 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
LTN1-203ENST00000389195 NCANO14594 1321 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 F8VP50 259 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 PMM2O15305 246 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 DAPK3O43293 454 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 TNNC2P02585 160 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 RFX1P22670 979 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 CCND3P30281 292 aaPredicted RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 NOMO3P69849 1222 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 HLTFQ14527 1009 aaKnown RBP eCLIP10.82□□□□□ -0.686e-6■■■■□ 22
LTN1-203ENST00000389195 BRD3Q15059 726 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 FSCN1Q16658 493 aaKnown RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 MTERF4Q7Z6M4 381 aaKnown RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 KRT222Q8N1A0 295 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 MMGT1Q8N4V1 131 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 PIWIL1Q96J94 861 aaKnown RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.82□□□□□ -0.688e-7■■■■■ 27.7
LTN1-203ENST00000389195 C10orf88Q9H8K7 445 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 FAM49BQ9NUQ9 324 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 PRMT7Q9NVM4 692 aaPredicted RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 NME7Q9Y5B8 376 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 A0A1B0GUA9 196 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 BTNL10A8MVZ5 291 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 PGRMC1O00264 195 aaKnown RBP10.82□□□□□ -0.68
LTN1-203ENST00000389195 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 OGDHQ02218 1023 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 SGSM1Q2NKQ1 1148 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 SMTNL2Q2TAL5 461 aa10.82□□□□□ -0.68
LTN1-203ENST00000389195 DNAJC21Q5F1R6 531 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms