RNA–Protein interactions for RNA: ENST00000384281.1

SNORA54-201, Transcript of small nucleolar RNA, H/ACA box 54, humanhuman

BASIC

Gene SNORA54, Length 123 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA54-201ENST00000384281 NELFCDQ8IXH7 590 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 THNSL1Q8IYQ7 743 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 IQUBQ8NA54 791 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 CNNM3Q8NE01 707 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 BEST2Q8NFU1 509 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 OR10T2Q8NGX3 314 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 KBTBD7Q8WVZ9 684 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 IFT74Q96LB3 600 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 ZNF558Q96NG5 402 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SAMD11Q96NU1 681 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 IPO9Q96P70 1041 aaKnown RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 CLSTN3Q9BQT9 956 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 FAM213AQ9BRX8 229 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 TMEM175Q9BSA9 504 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 FUCA2Q9BTY2 467 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 C11orf84Q9BUA3 381 aaPredicted RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 MRPL9Q9BYD2 267 aaKnown RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 MTMR12Q9C0I1 747 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SCAND2PQ9GZW5 306 aaPredicted RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SDCBP2Q9H190 292 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 S1PR5Q9H228 398 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 NSUN3Q9H649 340 aaKnown RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 PDE11AQ9HCR9 933 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SLC39A2Q9NP94 309 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 AAASQ9NRG9 546 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 HSPBP1Q9NZL4 362 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 CHMP5Q9NZZ3 219 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 LARSQ9P2J5 1176 aaKnown RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 HMGXB4Q9UGU5 601 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 AJAP1Q9UKB5 411 aaPredicted RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 ADAM28Q9UKQ2 775 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 ANGPTL2Q9UKU9 493 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 CFAP45Q9UL16 551 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 TRAF3IP3Q9Y228 551 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 PCDHB7Q9Y5E2 793 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 PCDHA5Q9Y5H7 936 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 IRAK3Q9Y616 596 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 DOCK6Q96HP0 2047 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 SPTAN1Q13813 2472 aaKnown RBP3.35□□□□□ -1.87
SNORA54-201ENST00000384281 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
SNORA54-201ENST00000384281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 WDR27A2RRH5 827 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SHISA7A6NL88 538 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 EIF4E1BA6NMX2 242 aaKnown RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 LRRIQ3A6PVS8 624 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 H3BQ06 376 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PODXLO00592 558 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PER2O15055 1255 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 TEX28O15482 410 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 HOXA2O43364 376 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 TADA3O75528 432 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 AKAP3O75969 853 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SEC24AO95486 1093 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 LMNAP02545 664 aaKnown RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 NR3C1P04150 777 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 RB1P06400 928 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CLTAP09496 248 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 OR4Q2P0C623 313 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 TRIM49P0CI25 452 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 TRIM49CP0CI26 452 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SKIP12755 728 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 IDEP14735 1019 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 ZSCAN20P17040 1043 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 GARTP22102 1010 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PPM1AP35813 382 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 TXLNAP40222 546 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 NRIP1P48552 1158 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 LIG4P49917 911 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CACNA2D1P54289 1103 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 RIPPLY3P57055 190 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 UBE2HP62256 183 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 UBE3AQ05086 875 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PPP3CAQ08209 521 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PSMD6Q15008 389 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 KNOP1Q1ED39 458 aaKnown RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SLC5A9Q2M3M2 681 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CBWD6Q4V339 395 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CBWD3Q5JTY5 395 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CBWD5Q5RIA9 395 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 C9orf57Q5W0N0 161 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CENPPQ6IPU0 288 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SLC8B1Q6J4K2 584 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 C11orf57Q6ZUT1 292 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 APTXQ7Z2E3 356 aaKnown RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 RNF135Q8IUD6 432 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SLC9A9Q8IVB4 645 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 CCDC65Q8IXS2 484 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 VPS52Q8N1B4 723 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 EFHBQ8N7U6 833 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 UBR7Q8N806 425 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 MRPL43Q8N983 215 aaKnown RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 STKLD1Q8NE28 680 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 RIN3Q8TB24 985 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 LNX1Q8TBB1 728 aaPredicted RBP3.34□□□□□ -1.87
SNORA54-201ENST00000384281 RSPH1Q8WYR4 309 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 SEMA4DQ92854 862 aa3.34□□□□□ -1.87
SNORA54-201ENST00000384281 PABPC5Q96DU9 382 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms