RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 TNNC1P63316 161 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 NOMO3P69849 1222 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 SP3Q02447 781 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 MYO1EQ12965 1108 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 SNX17Q15036 470 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 GNASQ5JWF2 1037 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 TMEM35BQ8NCS4 154 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 CXorf38Q8TB03 319 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 ZNF564Q8TBZ8 553 aaPredicted RBP14.48□□□□□ -0.09
SEC13-203ENST00000383801 DNAJB3Q8WWF6 145 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.48□□□□□ -0.09
SEC13-203ENST00000383801 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
SEC13-203ENST00000383801 LHX5Q9H2C1 402 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.48□□□□□ -0.093e-6■■■■■ 39.7
SEC13-203ENST00000383801 CNOT8Q9UFF9 292 aaKnown RBP14.48□□□□□ -0.09
SEC13-203ENST00000383801 SIX4Q9UIU6 781 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 RALGAPA2Q2PPJ7 1873 aa14.48□□□□□ -0.09
SEC13-203ENST00000383801 CITO14578 2027 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 M0QZ92 97 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 TREHO43280 583 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 THAP12O43422 761 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CABYRO75952 493 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CALB1P05937 261 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 NFICP08651 508 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CTNNA2P26232 953 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CXCR5P32302 372 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 TAP1Q03518 808 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 ZBTB6Q15916 424 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 WDR72Q3MJ13 1102 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 XKR4Q5GH76 650 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CC2D1AQ6P1N0 951 aaPredicted RBP14.47□□□□□ -0.09
SEC13-203ENST00000383801 ALKAL1Q6UXT8 129 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 MON1BQ7L1V2 547 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CDR2LQ86X02 465 aaPredicted RBP14.47□□□□□ -0.09
SEC13-203ENST00000383801 TMEM192Q8IY95 271 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 LRRC52Q8N7C0 313 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 EIF1ADQ8N9N8 165 aaKnown RBP14.47□□□□□ -0.09
SEC13-203ENST00000383801 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
SEC13-203ENST00000383801 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 TRIB2Q92519 343 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 NUP85Q9BW27 656 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 DNAI2Q9GZS0 605 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 ACP6Q9NPH0 428 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CHST12Q9NRB3 414 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 DPP3Q9NY33 737 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 GTF2IRD1Q9UHL9 959 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 COG5Q9UP83 839 aa14.47□□□□□ -0.09
SEC13-203ENST00000383801 DDX3YO15523 660 aaKnown RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 CSDE1O75534 798 aaKnown RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 CD4P01730 458 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 ITGB3P05106 788 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 KRT19P08727 400 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 FAM163BP0C2L3 166 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 CYP3A5P20815 502 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 TNFRSF8P28908 595 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 POLR2BP30876 1174 aaKnown RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 BEX3Q00994 111 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 PTPN11Q06124 597 aaPredicted RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 ARHGEF6Q15052 776 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 STILQ15468 1287 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 CYP4F22Q6NT55 531 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 RUFY4Q6ZNE9 571 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 BEST2Q8NFU1 509 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 CYFIP2Q96F07 1278 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 HPDLQ96IR7 371 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 SNX27Q96L92 541 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 OSMRQ99650 979 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 CELF4Q9BZC1 486 aaKnown RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 TRIM6Q9C030 488 aaPredicted RBP14.46□□□□□ -0.09
SEC13-203ENST00000383801 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 PARVAQ9NVD7 372 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 STRIP2Q9ULQ0 834 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 SCN10AQ9Y5Y9 1956 aa14.46□□□□□ -0.09
SEC13-203ENST00000383801 MYO1FO00160 1098 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 CEP104O60308 925 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 CLSTN1O94985 981 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 NPTXRO95502 500 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 TFRCP02786 760 aaKnown RBP14.45□□□□□ -0.1
SEC13-203ENST00000383801 RHOXF2BP0C7M4 288 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 ATF7P17544 494 aaPredicted RBP14.45□□□□□ -0.1
SEC13-203ENST00000383801 MMP8P22894 467 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 MAP2K2P36507 400 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 INCA1Q0VD86 236 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 PLEKHA7Q6IQ23 1121 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 FAM43BQ6ZT52 329 aaPredicted RBP14.45□□□□□ -0.1
SEC13-203ENST00000383801 DNAAF5Q86Y56 855 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 KLHDC9Q8NEP7 349 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 PXYLP1Q8TE99 480 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 RHOXF2Q9BQY4 288 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 MIS12Q9H081 205 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 OGFRQ9NZT2 677 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 ADAM22Q9P0K1 906 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 UBQLN1Q9UMX0 589 aaKnown RBP14.45□□□□□ -0.1
SEC13-203ENST00000383801 GABRQQ9UN88 632 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 PACSIN2Q9UNF0 486 aaPredicted RBP14.45□□□□□ -0.1
SEC13-203ENST00000383801 PCDHA3Q9Y5H8 950 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 UMODL1Q5DID0 1318 aa14.45□□□□□ -0.1
SEC13-203ENST00000383801 MEFVO15553 781 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms