RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 BFSP1Q12934 665 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 MYBPC2Q14324 1141 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 COL19A1Q14993 1142 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 VARS2Q5ST30 1063 aaKnown RBP20.92■□□□□ 0.94
GTF3A-201ENST00000381140 ANKRD40Q6AI12 368 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 SCARA3Q6AZY7 606 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 PDXDC1Q6P996 788 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 PPFIBP1Q86W92 1011 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 PLEKHO2Q8TD55 490 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 ZNF560Q96MR9 790 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 APOL5Q9BWW9 433 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 ITGA11Q9UKX5 1188 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 PCDHB8Q9UN66 801 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 SYN3O14994 580 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 AKAP3O75969 853 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 SPATA31D3P0C874 917 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 NFIL3Q16649 462 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 EDRF1Q3B7T1 1238 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 CENPPQ6IPU0 288 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 SPATA31D4Q6ZUB0 917 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 ANKS3Q6ZW76 656 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 FAM186BQ8IYM0 893 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 APPL2Q8NEU8 664 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 SLC22A17Q8WUG5 538 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 NELFBQ8WX92 580 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 DHTKD1Q96HY7 919 aaPredicted RBP20.91■□□□□ 0.94
GTF3A-201ENST00000381140 SENP8Q96LD8 212 aa20.91■□□□□ 0.94
GTF3A-201ENST00000381140 LRRIQ3A6PVS8 624 aaPredicted RBP20.9■□□□□ 0.94
GTF3A-201ENST00000381140 PPP1R3GB7ZBB8 358 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CETN3O15182 167 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CLSTN1O94985 981 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CCNE1P24864 410 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 PPP1R2P41236 205 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 KCNQ1P51787 676 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CLCN4P51793 760 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 ARPP19P56211 112 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 STX17P56962 302 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 DLG4P78352 724 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 MRPS5P82675 430 aaKnown RBP20.9■□□□□ 0.94
GTF3A-201ENST00000381140 RBP5P82980 135 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 SV2CQ496J9 727 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 TRAPPC11Q7Z392 1133 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 USP37Q86T82 979 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 TRIML1Q8N9V2 468 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CASP10Q92851 521 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 CLEC1BQ9P126 229 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 FNIP2Q9P278 1114 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 SIX4Q9UIU6 781 aa20.9■□□□□ 0.94
GTF3A-201ENST00000381140 M0QZQ0 153 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 ADAM12O43184 909 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 PHACTR2O75167 634 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 GLUD1P00367 558 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 ODC1P11926 461 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 KRT13P13646 458 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 OR1D2P34982 312 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 PSMC2P35998 433 aaKnown RBP20.89■□□□□ 0.93
GTF3A-201ENST00000381140 PNPLA4P41247 253 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 AARSP49588 968 aaKnown RBP eCLIP20.89■□□□□ 0.93
GTF3A-201ENST00000381140 BIRC3Q13489 604 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 AAK1Q2M2I8 961 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 CTXN3Q4LDR2 81 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 GPR65Q8IYL9 337 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 PARD3BQ8TEW8 1205 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 TMEM174Q8WUU8 243 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 ATXN2LQ8WWM7 1075 aaKnown RBP20.89■□□□□ 0.93
GTF3A-201ENST00000381140 ZNF516Q92618 1163 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 CLSTN3Q9BQT9 956 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 MTRRQ9UBK8 725 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 CD207Q9UJ71 328 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 CDY1Q9Y6F8 540 aa20.89■□□□□ 0.93
GTF3A-201ENST00000381140 SYCE3A1L190 88 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 KPNA7A9QM74 516 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 H7C4K7 107 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 CYB561D2O14569 222 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 EPB41P11171 864 aaKnown RBP20.88■□□□□ 0.93
GTF3A-201ENST00000381140 VAMP7P51809 220 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 YWHAHQ04917 246 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-201ENST00000381140 LRRC63Q05C16 580 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 KCNC3Q14003 757 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 ANKRD54Q6NXT1 300 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 RSPO2Q6UXX9 243 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-201ENST00000381140 MMRN2Q9H8L6 949 aa20.88■□□□□ 0.93
GTF3A-201ENST00000381140 C2orf16Q68DN1 1984 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 TRIM49P0CI25 452 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 TRIM49CP0CI26 452 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 FKBP3Q00688 224 aaKnown RBP20.87■□□□□ 0.93
GTF3A-201ENST00000381140 PAK1Q13153 545 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 LEXMQ3ZCV2 418 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 ZNF280DQ6N043 979 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 LRRC52Q8N7C0 313 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 C12orf76Q8N812 135 aaPredicted RBP20.87■□□□□ 0.93
GTF3A-201ENST00000381140 CXorf38Q8TB03 319 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 TMC2Q8TDI7 906 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 HPDLQ96IR7 371 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 ASB2Q96Q27 587 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 MAN1C1Q9NR34 630 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 BACE2Q9Y5Z0 518 aa20.87■□□□□ 0.93
GTF3A-201ENST00000381140 BICDL2A1A5D9 508 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 TGM5O43548 720 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms