RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 NIPA2Q8N8Q9 360 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 FRMD8P1Q9BZ68 369 aaPredicted RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 GGA3Q9NZ52 723 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 CHORDC1Q9UHD1 332 aaPredicted RBP13.45□□□□□ -0.26
PUDP-201ENST00000381077 EFR3BQ9Y2G0 817 aa13.45□□□□□ -0.26
PUDP-201ENST00000381077 PTPRJQ12913 1337 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
PUDP-201ENST00000381077 FAM189A1O60320 539 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 MSCO60682 206 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 GSCP56915 257 aaPredicted RBP13.44□□□□□ -0.26
PUDP-201ENST00000381077 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 CACNA2D3Q8IZS8 1091 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 RIBC1Q8N443 379 aaPredicted RBP13.44□□□□□ -0.26
PUDP-201ENST00000381077 TMEM35BQ8NCS4 154 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 PCYT2Q99447 389 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 OSBPL8Q9BZF1 889 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 PPCSQ9HAB8 311 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.262e-7■■■■■ 93.2
PUDP-201ENST00000381077 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
PUDP-201ENST00000381077 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 PTPN22Q9Y2R2 807 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
PUDP-201ENST00000381077 TP73O15350 636 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 TLR3O15455 904 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 TTC4O95801 387 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ABHD2P08910 425 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 KCNJ1P48048 391 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 PIGHQ14442 188 aaPredicted RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 DUOXA2Q1HG44 320 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 NIF3L1Q9GZT8 377 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 SPATC1LQ9H0A9 340 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 CDC42EP4Q9H3Q1 356 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 EFCC1Q9HA90 598 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 CEP83Q9Y592 693 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 NUB1Q9Y5A7 615 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 TJP3O95049 919 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 GHRP10912 638 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 TMOD1P28289 359 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 WNT7BP56706 349 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 POU5F1BQ06416 359 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 AUHQ13825 339 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 ITIH4Q14624 930 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 MAPK6Q16659 721 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 SEPT14Q6ZU15 432 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 C1orf54Q8WWF1 131 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ZNF317Q96PQ6 595 aaPredicted RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 ACO2Q99798 780 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 C11orf70Q9BRQ4 267 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 NFKBIZQ9BYH8 718 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 AAASQ9NRG9 546 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 ANKFY1Q9P2R3 1169 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 DRG1Q9Y295 367 aaKnown RBP13.43□□□□□ -0.26
PUDP-201ENST00000381077 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
PUDP-201ENST00000381077 TCRBV5S1A1TA0A578 114 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 DCDC2CA8MYV0 355 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 B4GALT4O60513 344 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 TMEM191BP0C7N4 346 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 RALAP11233 206 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 DRD4P21917 467 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 PROZP22891 400 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 TFDP1Q14186 410 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 LACTB2Q53H82 288 aaPredicted RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 SPOPLQ6IQ16 392 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 CPLX4Q7Z7G2 160 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 CPNE8Q86YQ8 564 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 MICALL1Q8N3F8 863 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 TRPM4Q8TD43 1214 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 FNIP1Q8TF40 1166 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 SEC16BQ96JE7 1060 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 ZBTB45Q96K62 511 aaPredicted RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 CABS1Q96KC9 395 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 INTS9Q9NV88 658 aaKnown RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 LGALS13Q9UHV8 139 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 CPSF3Q9UKF6 684 aaKnown RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 CXCL11O14625 94 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 IL18RAPO95256 599 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 CHN1P15882 459 aa13.42□□□□□ -0.26
PUDP-201ENST00000381077 POLR2BP30876 1174 aaKnown RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
PUDP-201ENST00000381077 CNTN2Q02246 1040 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms