RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 TREML2Q5T2D2 321 aa17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 CAPN12Q6ZSI9 719 aa17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 SUFUQ9UMX1 484 aa17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 SPAG7O75391 227 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 ANP32DO95626 131 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 STX2P32856 288 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 TAS2R40P59535 323 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 COPS2P61201 443 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 BNIP1Q12981 228 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 SLCO2A1Q92959 643 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 TCHPQ9BT92 498 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 CYP26B1Q9NR63 512 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 GPC3P51654 580 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 TMED2Q15363 201 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 MCOLN2Q8IZK6 566 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 MRRFQ96E11 262 aaKnown RBP17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 FNBP1Q96RU3 617 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
NKX3-1-201ENST00000380871 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 NCKAP1LP55160 1127 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 WNT7BP56706 349 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ALCAMQ13740 583 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF268Q14587 947 aaPredicted RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 CFAP73A6NFT4 308 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 UNGP13051 313 aaPredicted RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 SSR1P43307 286 aaKnown RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 GNPTABQ3T906 1256 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ZBTB41Q5SVQ8 909 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ECHDC2Q86YB7 292 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ZSCAN5DPP0CG00 497 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 MAPTP10636 758 aaKnown RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ATP13A4Q4VNC1 1196 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 CDR2LQ86X02 465 aaPredicted RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 GPRASP2Q96D09 838 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 C11orf70Q9BRQ4 267 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 TACO1Q9BSH4 297 aaKnown RBP17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
NKX3-1-201ENST00000380871 MYPNQ86TC9 1320 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 PI4K2BG5E9Z4 385 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 LYPLA2O95372 231 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 GAS8O95995 478 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 FDX1P10109 184 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 TCF4P15884 667 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 FASTKD3Q14CZ7 662 aaKnown RBP17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 IZUMO3Q5VZ72 239 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 COQ4Q9Y3A0 265 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 WDR4P57081 412 aaKnown RBP17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF516Q92618 1163 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 PPP1R16BQ96T49 567 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 NEU2Q9Y3R4 380 aa17.24■□□□□ 0.35
NKX3-1-201ENST00000380871 FZD9O00144 591 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 PIAS1O75925 651 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 PGK2P07205 417 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 STRN3Q13033 797 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 NAA25Q14CX7 972 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 KAZNQ674X7 775 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 SCARA3Q6AZY7 606 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 REPS2Q8NFH8 660 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 KIFAP3Q92845 792 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 PLVAPQ9BX97 442 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 EBF2Q9HAK2 575 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 SLCO1B3Q9NPD5 702 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 UMODL1Q5DID0 1318 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 RASA4BC9J798 803 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 RASA4O43374 803 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 KRT10P13645 584 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ETS1P14921 441 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 TAC1P20366 129 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 CYP24A1Q07973 514 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 KLF1Q13351 362 aaPredicted RBP17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 EMC2Q15006 297 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 STXBP2Q15833 593 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 GPD1LQ8N335 351 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms