RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GOLGA6L10A0A0M3HER8 536 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 RRN3P2A6NIE6 340 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 CXCL8P10145 99 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 SLC1A1P43005 524 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 TFAMQ00059 246 aaKnown RBP20.52■□□□□ 0.88
GMDS-201ENST00000380805 MAP2K5Q13163 448 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 TRPC3Q13507 836 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 ZNF699Q32M78 642 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 PLEKHA7Q6IQ23 1121 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 CXorf38Q8TB03 319 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 ZNF606Q8WXB4 792 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 CPA5Q8WXQ8 436 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 VRTNQ9H8Y1 702 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 CISHQ9NSE2 258 aa20.52■□□□□ 0.88
GMDS-201ENST00000380805 ZHX1Q9UKY1 873 aaPredicted RBP20.52■□□□□ 0.88
GMDS-201ENST00000380805 GNEQ9Y223 722 aaKnown RBP20.52■□□□□ 0.88
GMDS-201ENST00000380805 FAM170AA1A519 330 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 CFHP08603 1231 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 STAG3L1P0CL83 205 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 ARF4P18085 180 aaPredicted RBP20.51■□□□□ 0.87
GMDS-201ENST00000380805 ECHS1P30084 290 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 CDH5P33151 784 aaPredicted RBP20.51■□□□□ 0.87
GMDS-201ENST00000380805 TMEM192Q8IY95 271 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 KIAA0319LQ8IZA0 1049 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 USP6NLQ92738 828 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 FAM212AQ96EL1 285 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 HINFPQ9BQA5 517 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 BCO2Q9BYV7 579 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 SIX4Q9UIU6 781 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 ANAPC7Q9UJX3 599 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 NFU1Q9UMS0 254 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 PCDHGC3Q9UN70 934 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 THSD7BQ9C0I4 1608 aa20.51■□□□□ 0.87
GMDS-201ENST00000380805 TMEM110-MUSTN1A8MSY1 372 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 THAP12O43422 761 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 SPOPO43791 374 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 TSPAN1O60635 241 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 F2P00734 622 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 VTNP04004 478 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 YWHAEP62258 255 aaKnown RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 ZNF211Q13398 564 aaPredicted RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 TMEM132AQ24JP5 1023 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 LIN9Q5TKA1 542 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 BTBD6Q96KE9 485 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 ZNF518BQ9C0D4 1074 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 MRPL47Q9HD33 250 aaKnown RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 NR2E1Q9Y466 385 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 A0A1B0GUA9 196 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 ESYT3A0FGR9 886 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 AGPSO00116 658 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 SYF2O95926 243 aaKnown RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 IGHA2P01877 340 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 MMP8P22894 467 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 RWDD2BP57060 319 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 DHX34Q14147 1143 aaKnown RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 TAF1CQ15572 869 aaPredicted RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 CYP1B1Q16678 543 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 HSP90B2PQ58FF3 399 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 SEL1L2Q5TEA6 688 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 NT5DC4Q86YG4 428 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 REM2Q8IYK8 340 aaPredicted RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 C1orf127Q8N9H9 656 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 FAM124BQ9H5Z6 455 aaPredicted RBP20.5■□□□□ 0.87
GMDS-201ENST00000380805 AMACRQ9UHK6 382 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 SCINQ9Y6U3 715 aa20.5■□□□□ 0.87
GMDS-201ENST00000380805 NFICP08651 508 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 ATICP31939 592 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 OSTNP61366 133 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 CDC42EP1Q00587 391 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 ALS2CLQ60I27 953 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 GDAP1L1Q96MZ0 367 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 ERVK-5Q9HDB9 667 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 ADAM22Q9P0K1 906 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 CPA4Q9UI42 421 aa20.49■□□□□ 0.87
GMDS-201ENST00000380805 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
GMDS-201ENST00000380805 FAM187AA6NFU0 413 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 LACTBL1A8MY62 500 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 PHF2O75151 1096 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 PROSCO94903 275 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
GMDS-201ENST00000380805 ZNF865P0CJ78 1059 aaPredicted RBP20.48■□□□□ 0.87
GMDS-201ENST00000380805 PYGMP11217 842 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 MAN1A1P33908 653 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 PCBP1Q15365 356 aaKnown RBP eCLIP20.48■□□□□ 0.873e-6■■□□□ 12.8
GMDS-201ENST00000380805 CPNE8Q86YQ8 564 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 NLRP7Q8WX94 980 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 C11orf70Q9BRQ4 267 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 RNF186Q9NXI6 227 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 PCYOX1Q9UHG3 505 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 LCMT1Q9UIC8 334 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 C2CD2Q9Y426 696 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
GMDS-201ENST00000380805 TCRBV5S1A1TA0A578 114 aa20.47■□□□□ 0.87
GMDS-201ENST00000380805 GOLGA6BA6NDN3 693 aa20.47■□□□□ 0.87
GMDS-201ENST00000380805 MYO1FO00160 1098 aa20.47■□□□□ 0.87
GMDS-201ENST00000380805 EIF4BP23588 611 aaKnown RBP20.47■□□□□ 0.87
GMDS-201ENST00000380805 CHRNA3P32297 505 aa20.47■□□□□ 0.87
GMDS-201ENST00000380805 CRHR2Q13324 411 aa20.47■□□□□ 0.87
GMDS-201ENST00000380805 MAMLD1Q13495 774 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms