RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ZC3H7BQ9UGR2 993 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 XPO7Q9UIA9 1087 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 F5H423 210 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 KCNN4O15554 427 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 PDGFRAP16234 1089 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 CA8P35219 290 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 CASP5P51878 434 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC20A2Q08357 652 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SGSM1Q2NKQ1 1148 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 RABGAP1LQ5R372 815 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 RGS9BPQ6ZS82 235 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 INPP4AQ96PE3 977 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 EXTL3O43909 919 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 PRKCBP05771 671 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 FGRP09769 529 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 HMGCS2P54868 508 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 EMC2Q15006 297 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SMAD1Q15797 465 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 BFARQ9NZS9 450 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ASAP2O43150 1006 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ENO1P06733 434 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 GTF2H1P32780 548 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ESRRGP62508 458 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SMTNL2Q2TAL5 461 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 CD302Q8IX05 232 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC26A7Q8TE54 656 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 PFDN1O60925 122 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 OSBPP22059 807 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 KCNA1Q09470 495 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 PTK7Q13308 1070 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TTC39CQ8N584 583 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 PGM2Q96G03 612 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 MED15Q96RN5 788 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 SUFUQ9UMX1 484 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 KRT4P19013 534 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TAAR1Q96RJ0 339 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 MAFGO15525 162 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 RIPK2O43353 540 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 FSBPO95073 299 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 PYGMP11217 842 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 NPTX2P47972 431 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 GRIK5Q16478 980 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TRIM56Q9BRZ2 755 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
DNMT3A-204ENST00000380756 APOL1O14791 398 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 PSTPIP1O43586 416 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SLITRK3O94933 977 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 KRT10P13645 584 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 DNAJC9Q8WXX5 260 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 GANQ9H2C0 597 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 DDX4Q9NQI0 724 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 PEAK1Q9H792 1746 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 IQCA1LA6NCM1 817 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 EML1O00423 815 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ZNF263O14978 683 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ANP32DO95626 131 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 CUL2Q13617 745 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 NIF3L1Q9GZT8 377 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 O00370 1275 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 GHRP10912 638 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 GEMIN4P57678 1058 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SESN2P58004 480 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 Q3C1V9 767 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ACAD11Q709F0 780 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms