RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 DNTTIP2Q5QJE6 756 aaKnown RBP29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 C16orf59Q7L2K0 433 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 NPAS4Q8IUM7 802 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 C16orf45Q96MC5 204 aaPredicted RBP29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 DESI2Q9BSY9 194 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 POLIQ9UNA4 740 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 FOXN3O00409 490 aaPredicted RBP29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 LRPAP1P30533 357 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 CUL2Q13617 745 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 ZNF667Q5HYK9 610 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 SFMBT2Q5VUG0 894 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 NIF3L1Q9GZT8 377 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 VRTNQ9H8Y1 702 aa29.75■■■□□ 2.35
TRAPPC10-202ENST00000380221 CASTOR2A6NHX0 329 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 UPP2O95045 317 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 FPGSQ05932 587 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 MYO1EQ12965 1108 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 PPIGQ13427 754 aaKnown RBP eCLIP29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 ABI1Q8IZP0 508 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 LRRC52Q8N7C0 313 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 URGCPQ8TCY9 931 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 NUCKS1Q9H1E3 243 aaKnown RBP29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 ZMYND8Q9ULU4 1186 aaPredicted RBP29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 MYO6Q9UM54 1294 aa29.74■■■□□ 2.35
TRAPPC10-202ENST00000380221 CLCNKBP51801 687 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 CDK17Q00537 523 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 ARID5AQ03989 594 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 SCARA5Q6ZMJ2 495 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 OTOP2Q7RTS6 562 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 RABGGTAQ92696 567 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 DPF3Q92784 378 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 CASD1Q96PB1 797 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 PAAF1Q9BRP4 392 aa29.73■■■□□ 2.35
TRAPPC10-202ENST00000380221 STAU1O95793 577 aaKnown RBP29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 TBXAS1P24557 533 aaPredicted RBP29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 IGFBP6P24592 240 aaPredicted RBP29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 STAT1P42224 750 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 ASPAP45381 313 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 ENOSF1Q7L5Y1 443 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 FAM81BQ96LP2 452 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 TBC1D13Q9NVG8 400 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 ADGRG1Q9Y653 693 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 CCDC175P0C221 793 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 SOX5P35711 763 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 DEFB103AP81534 67 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 ZNF280BQ86YH2 543 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 REXO1L1PQ8IX06 675 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 SHC3Q92529 594 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 SYN2Q92777 582 aaPredicted RBP29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 RNF216Q9NWF9 866 aaPredicted RBP29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 AIPL1Q9NZN9 384 aa29.72■■■□□ 2.35
TRAPPC10-202ENST00000380221 GFPT2O94808 682 aa29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 DDHD2O94830 711 aa29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 WDR5P61964 334 aaKnown RBP29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 TUSC3Q13454 348 aa29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 NYAP1Q6ZVC0 841 aa29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 KANSL3Q9P2N6 904 aa29.71■■■□□ 2.35
TRAPPC10-202ENST00000380221 PODXLO00592 558 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 SPTLC1O15269 473 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 HOXA2O43364 376 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 B4GALT3O60512 393 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 WEE2P0C1S8 567 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 USP8P40818 1118 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 EPHB4P54760 987 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 PTPN14Q15678 1187 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 ZNF365Q70YC5 407 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 TMCO2Q7Z6W1 182 aaPredicted RBP29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 ZNF560Q96MR9 790 aa29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 NHEJ1Q9H9Q4 299 aaPredicted RBP29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 EPN1Q9Y6I3 576 aaPredicted RBP29.7■■■□□ 2.35
TRAPPC10-202ENST00000380221 EFCAB14O75071 495 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 AMHP03971 560 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 TAF6P49848 677 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 RNASELQ05823 741 aaKnown RBP29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 ASIC2Q16515 512 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 UPP1Q16831 310 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 IRF2BP2Q7Z5L9 587 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 TNS4Q8IZW8 715 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 TOP1MTQ969P6 601 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 SNX9Q9Y5X1 595 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 BAIAP3O94812 1187 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 NDUFA10O95299 355 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 FGBP02675 491 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 RPL9P32969 192 aaKnown RBP29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 PNPLA4P41247 253 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 RAP1GAPP47736 663 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 LILRA4P59901 499 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 TNNC1P63316 161 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 C3orf58Q8NDZ4 430 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 ACRBPQ8NEB7 543 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 MMS19Q96T76 1030 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 BCO2Q9BYV7 579 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 SMYD3Q9H7B4 428 aa29.69■■■□□ 2.34
TRAPPC10-202ENST00000380221 TBKBP1A7MCY6 615 aa29.68■■■□□ 2.34
TRAPPC10-202ENST00000380221 P4HA1P13674 534 aa29.68■■■□□ 2.34
TRAPPC10-202ENST00000380221 TNNT1P13805 278 aa29.68■■■□□ 2.34
TRAPPC10-202ENST00000380221 CD58P19256 250 aa29.68■■■□□ 2.34
TRAPPC10-202ENST00000380221 ACO1P21399 889 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms