RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
PCNA-201ENST00000379143 APPL2Q8NEU8 664 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
PCNA-201ENST00000379143 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
PCNA-201ENST00000379143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.352e-8■■■■■ 28.5
PCNA-201ENST00000379143 XIRP2A4UGR9 3374 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 KPNA7A9QM74 516 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 M0QZQ0 153 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 CXCL14O95715 111 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 C4BPAP04003 597 aaKnown RBP12.84□□□□□ -0.35
PCNA-201ENST00000379143 FGFR3P22607 806 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 ATICP31939 592 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 CA8P35219 290 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 BRCC3P46736 316 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 BIRC3Q13489 604 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 DCAF17Q5H9S7 520 aaPredicted RBP12.84□□□□□ -0.35
PCNA-201ENST00000379143 TCERG1LQ5VWI1 586 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 PLPP4Q5VZY2 271 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 KRT39Q6A163 491 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 CXorf38Q8TB03 319 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 ENOX1Q8TC92 643 aaKnown RBP12.84□□□□□ -0.35
PCNA-201ENST00000379143 MED15Q96RN5 788 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
PCNA-201ENST00000379143 EMILIN2Q9BXX0 1053 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 DSEQ9UL01 958 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
PCNA-201ENST00000379143 NCOR1O75376 2440 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 SYCE3A1L190 88 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 PPEF2O14830 753 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 NCK2O43639 380 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 CAVIN2O95810 425 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 TRIM49P0CI25 452 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 TRIM49CP0CI26 452 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 ODC1P11926 461 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 IRS1P35568 1242 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 NCOA4Q13772 614 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 ZSCAN23Q3MJ62 389 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 C15orf39Q6ZRI6 1047 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 ANKS3Q6ZW76 656 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 SV2AQ7L0J3 742 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 CEP57Q86XR8 500 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 RIN2Q8WYP3 895 aaPredicted RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 PIK3R5Q8WYR1 880 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 GDAP2Q9NXN4 497 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 FNIP2Q9P278 1114 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
PCNA-201ENST00000379143 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.36
PCNA-201ENST00000379143 H7C4K7 107 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 I3L4J1 428 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 C2CD2LO14523 706 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 HUS1O60921 280 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 LILRB3O75022 631 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 CSPG5O95196 566 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 CST3P01034 146 aaPredicted RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 TYMPP19971 482 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 IGFBP6P24592 240 aaPredicted RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 GCLMP48507 274 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 MXI1P50539 228 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 MYL5Q02045 173 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 YWHAHQ04917 246 aaPredicted RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 CETN1Q12798 172 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 ANO6Q4KMQ2 910 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 RTP2Q5QGT7 225 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 PPFIBP1Q86W92 1011 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 METTL23Q86XA0 190 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 TRIM59Q8IWR1 403 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 TAF4BQ92750 862 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
PCNA-201ENST00000379143 DNAJC25Q9H1X3 360 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 VRTNQ9H8Y1 702 aa12.82□□□□□ -0.36
PCNA-201ENST00000379143 RXFP1Q9HBX9 757 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms