RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 C1orf53Q5VUE5 145 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 CCDC25Q86WR0 208 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 RNF10Q8N5U6 811 aaKnown RBP7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 DNERQ8NFT8 737 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 ACER1Q8TDN7 264 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 RMND1Q9NWS8 449 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 PEX6Q13608 980 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 CDHR3Q6ZTQ4 885 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 LONP2Q86WA8 852 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 MOV10L1Q9BXT6 1211 aaKnown RBP7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 OGDHLQ9ULD0 1010 aa7.85□□□□□ -1.15
GPCPD1-201ENST00000379019 TMX2-CTNND1H3BSU7 103 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 PEX10O60683 326 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CABYRO75952 493 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 USP1O94782 785 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 OR6B1O95007 311 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CCL5P13501 91 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 ARRB2P32121 409 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 FLT3LGP49771 235 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CCDC63Q8NA47 563 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 HEMGNQ9BXL5 484 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.84□□□□□ -1.151e-8■■■■■ 34.4
GPCPD1-201ENST00000379019 KCNK13Q9HB14 408 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 ACSS2Q9NR19 701 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 OPA1O60313 960 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 AMPD1P23109 780 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 RFC5P40937 340 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 PRKCZQ05513 592 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 WDR72Q3MJ13 1102 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 USH1GQ495M9 461 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 NUGGCQ68CJ6 796 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 EHMT1Q9H9B1 1298 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 KRT82Q9NSB4 513 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 DDX25Q9UHL0 483 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 G3BP2Q9UN86 482 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 MRPL11Q9Y3B7 192 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 GOLGA6L7A0A1B0GV03 622 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CCDC85CA6NKD9 419 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 PGRMC1O00264 195 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 FSCN2O14926 492 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 NUDT17P0C025 328 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 ARSAP15289 507 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 DRP2Q13474 957 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CPLX4Q7Z7G2 160 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 IGDCC3Q8IVU1 814 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 CACNA2D3Q8IZS8 1091 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 NT5C1BQ96P26 610 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 NOCTQ9UK39 431 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 IGLV3-22A0A075B6J6 115 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 STK10O94804 968 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 RPA3P35244 121 aaPredicted RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 LMBRD2Q68DH5 695 aaPredicted RBP7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 PEX26Q7Z412 305 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 C4orf33Q8N1A6 199 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 IL31RAQ8NI17 732 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 WHAMMQ8TF30 809 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 IWS1Q96ST2 819 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 SPZ1Q9BXG8 430 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 VTA1Q9NP79 307 aa7.84□□□□□ -1.15
GPCPD1-201ENST00000379019 MSH4O15457 936 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 INHAP05111 366 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 CST5P28325 142 aaPredicted RBP7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 TAS2R40P59535 323 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 DR1Q01658 176 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 SMAD1Q15797 465 aaKnown RBP7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ASIC2Q16515 512 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ODF2Q5BJF6 829 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 C3orf20Q8ND61 904 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 DDX1Q92499 740 aaKnown RBP7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ZSWIM1Q9BR11 485 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 MAK16Q9BXY0 300 aaKnown RBP7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 FAM155BO75949 473 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ADRB2P07550 413 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 PRKCIP41743 596 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 RAB27AP51159 221 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ZNF792Q3KQV3 632 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 C1orf131Q8NDD1 294 aaKnown RBP7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.162e-7■■■□□ 15.2
GPCPD1-201ENST00000379019 TANC1Q9C0D5 1861 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 TBX10O75333 385 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 SLITRK3O94933 977 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 CTNNA2P26232 953 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 PAFAH1B1P43034 410 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 MSH2P43246 934 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 GDF10P55107 478 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 Q3C1V9 767 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 ACSBG2Q5FVE4 666 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 CNNM4Q6P4Q7 775 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 CCDC121Q6ZUS5 278 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 HAPLN2Q9GZV7 340 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 CCDC113Q9H0I3 377 aa7.83□□□□□ -1.16
GPCPD1-201ENST00000379019 AK5Q9Y6K8 562 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms