RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 CDHR1Q96JP9 859 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 SCLT1Q96NL6 688 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 CGRRF1Q99675 332 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 TRAIPQ9BWF2 469 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 OSBPL8Q9BZF1 889 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 PORCNQ9H237 461 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 ACAD9Q9H845 621 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 TMEM120BA0PK00 339 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 THAP12O43422 761 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 TCF4P15884 667 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 NOP14P78316 857 aaKnown RBP20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 PHF13Q86YI8 300 aaPredicted RBP20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 KATNAL2Q8IYT4 538 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 DEPTORQ8TB45 409 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 MSTO1Q9BUK6 570 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 DHX33Q9H6R0 707 aaKnown RBP20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 ZNF302Q9NR11 478 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 KLC4Q9NSK0 619 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 FBXO40Q9UH90 709 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 CNTNAP2Q9UHC6 1331 aa20.73■□□□□ 0.91
SHROOM1-202ENST00000378676 GHRP10912 638 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 HARSP12081 509 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 SSR1P43307 286 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 MNAT1P51948 309 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 TRIM72Q6ZMU5 477 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 PAXIP1Q6ZW49 1069 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 P3H4Q92791 437 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 TEX13BQ9BXU2 312 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 AS3MTQ9HBK9 375 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 MLXIPLQ9NP71 852 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 TLR3O15455 904 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 NF2P35240 595 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 ARL2P36404 184 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 NAMPTP43490 491 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 ITIH4Q14624 930 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 R3HDM1Q15032 1099 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 CCNG2Q16589 344 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 GNPTABQ3T906 1256 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 ATP13A4Q4VNC1 1196 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 IZUMO3Q5VZ72 239 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 CYP4X1Q8N118 509 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 ZNF112Q9UJU3 913 aa20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 MAFBQ9Y5Q3 323 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-202ENST00000378676 PI4K2BG5E9Z4 385 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 K7ERI5 159 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 NFKBIEO00221 500 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 PICK1Q9NRD5 415 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 HOMER3Q9NSC5 361 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 SAMD15Q9P1V8 674 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 CNTN6Q9UQ52 1028 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 ADGRA2Q96PE1 1338 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 A0A0B4J269 797 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 LOC102724159A0A0B4J2E5 919 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 TTLL13PA6NNM8 815 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 ABCD1P33897 745 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 RPL7AP62424 266 aaKnown RBP20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 CAV1Q03135 178 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 PWP2Q15269 919 aaKnown RBP20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 DCAF15Q66K64 600 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 CCDC91Q7Z6B0 441 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 FUKQ8N0W3 1084 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 MRPL47Q9HD33 250 aaKnown RBP20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 CD2APQ9Y5K6 639 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 ANK1P16157 1881 aa20.71■□□□□ 0.91
SHROOM1-202ENST00000378676 KLRC2P26717 231 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 ZNF252P-AS1Q0IIN9 211 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 MPP2Q14168 576 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 ZNF365Q70YC5 407 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 ANKS4BQ8N8V4 417 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 ANKRD42Q8N9B4 389 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 GLIS1Q8NBF1 620 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 EXD1Q8NHP7 514 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 C9orf72Q96LT7 481 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 CD248Q9HCU0 757 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 SCINQ9Y6U3 715 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 PTPRFP10586 1907 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 PEX10O60683 326 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 STAM2O75886 525 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 OAS1P00973 400 aaKnown RBP20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 GH1P01241 217 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 KRT10P13645 584 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 CNTN2Q02246 1040 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 C1QBPQ07021 282 aaKnown RBP20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 NCOA4Q13772 614 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 CYB5D1Q6P9G0 228 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 CATSPERGQ6ZRH7 1159 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 UBR7Q8N806 425 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 FEZF2Q8TBJ5 459 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 DYDC1Q8WWB3 177 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 VCPIP1Q96JH7 1222 aa20.7■□□□□ 0.9
SHROOM1-202ENST00000378676 A0A0G2JMZ2 1700 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 LRRC37A2A6NM11 1700 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 SPDYE16A6NNV3 312 aaPredicted RBP20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 ATP2A1O14983 1001 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms