RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PSMC3IPQ9P2W1 217 aaPredicted RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 UNC13BO14795 1591 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 TUFT1Q9NNX1 390 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 TUBE1Q9UJT0 475 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 PDS5AQ29RF7 1337 aaKnown RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 EGFRP00533 1210 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 AKR1B1P15121 316 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 FAM167AQ96KS9 214 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 MCEEQ96PE7 176 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 UCHL3P15374 230 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ITIH2P19823 946 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 MGAT5BQ3V5L5 792 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 C1orf131Q8NDD1 294 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 C9orf72Q96LT7 481 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 THTPAQ9BU02 230 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 PJA2O43164 708 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SEMA3FQ13275 785 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 RABGAP1LQ5R372 815 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ITPRIPL1Q6GPH6 555 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ADCK1Q86TW2 530 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 JAMLQ86YT9 394 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 TNS4Q8IZW8 715 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 GFM2Q969S9 779 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ULK4Q96C45 1275 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 THAP11Q96EK4 314 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 EGFL8Q99944 293 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 TMEM120BA0PK00 339 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 FMO5P49326 533 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 CYGBQ8WWM9 190 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 CASKIN2Q8WXE0 1202 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SH3BP1Q9Y3L3 701 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 MAP4P27816 1152 aaKnown RBP12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 MAPRE2Q15555 327 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 KRT4P19013 534 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 SERPINB4P48594 390 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 GOLPH3Q9H4A6 298 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 ACAD9Q9H845 621 aa12.57□□□□□ -0.4
PCDHA9-201ENST00000378122 OVOS2A0A0G2JMS6 1433 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 FAM107AO95990 144 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 ITGA8P53708 1063 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 CYB5D1Q6P9G0 228 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 TAS2R42Q7RTR8 314 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 REXO1L1PQ8IX06 675 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 ISCUQ9H1K1 167 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 DLGAP2Q9P1A6 1054 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 RPS6KA5O75582 802 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 ENO3P13929 434 aaPredicted RBP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 TARSP26639 723 aaKnown RBP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 PTK7Q13308 1070 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 PID1Q7Z2X4 250 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 TAF6LQ9Y6J9 622 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 GTPBP10A4D1E9 387 aaKnown RBP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 STK4Q13043 487 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 MAGEB5Q9BZ81 275 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 IL25Q9H293 177 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 A8MXQ7 604 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 F5H6K3 240 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 SLC9A1P19634 815 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 SOX11P35716 441 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 TRPC1P48995 793 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 KLRC3Q07444 240 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 STX3Q13277 289 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 PDIA5Q14554 519 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 MMGT1Q8N4V1 131 aa12.56□□□□□ -0.4
PCDHA9-201ENST00000378122 ELMO2Q96JJ3 720 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms