RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 EXD1Q8NHP7 514 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 HDAC11Q96DB2 347 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 GNAT1P11488 350 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 KRT4P19013 534 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CASP4P49662 377 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SLC10A5Q5PT55 438 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 GRAMD4Q6IC98 578 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 HES6Q96HZ4 224 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 TTYH3Q9C0H2 523 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 MMADHCQ9H3L0 296 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 RNF225M0QZC1 329 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ABLIM1O14639 778 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 EXTL3O43909 919 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ASNSP08243 561 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PAMP19021 973 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 IFI35P80217 286 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CCDC15Q0P6D6 951 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 KIF22Q14807 665 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CLEC16AQ2KHT3 1053 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 THTPAQ9BU02 230 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PAPOLBQ9NRJ5 636 aaKnown RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 NAALADL1Q9UQQ1 740 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 H3BRJ5 948 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 GOLGA8RI6L899 631 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 WEE2P0C1S8 567 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 UBTFL6P0CB48 400 aaPredicted RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 BCAR1P56945 870 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 AP1B1Q10567 949 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 CYLC2Q14093 348 aaPredicted RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 DUPD1Q68J44 220 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 HEATR6Q6AI08 1181 aaKnown RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 RSBN1LQ6PCB5 846 aaPredicted RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 DDI1Q8WTU0 396 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 JADE3Q92613 823 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 BTBD10Q9BSF8 475 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 MYLK2Q9H1R3 596 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 SNX25Q9H3E2 840 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 C17orf75Q9HAS0 396 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 ALG13Q9NP73 1137 aaKnown RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 ANKEF1Q9NU02 776 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 USP21Q9UK80 565 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 TTLL3Q9Y4R7 772 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 CYP11B1P15538 503 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 SLC12A3P55017 1021 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 IGBP1P78318 339 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 SLC34A1Q06495 639 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 FUT2Q10981 343 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 RDM1Q8NG50 284 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 TMC2Q8TDI7 906 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 ZBTB10Q96DT7 871 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 TRAPPC9Q96Q05 1148 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 MXRA8Q9BRK3 442 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 VPS11Q9H270 941 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 NINJ2Q9NZG7 142 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 CTNNAL1Q9UBT7 734 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.93
PCDH9-202ENST00000377865 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.93
PCDH9-202ENST00000377865 GOLGA8CPA6NN73 597 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 INO80B-WBP1J3KQ70 363 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 M0QYV0 167 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 PIK3R2O00459 728 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 MMP13P45452 471 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 KYAT1Q16773 422 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 TRMT5Q32P41 509 aaKnown RBP9.21□□□□□ -0.94
PCDH9-202ENST00000377865 THNSL1Q8IYQ7 743 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 KIRREL3Q8IZU9 778 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 LZICQ8WZA0 190 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 ART4Q93070 314 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 MCEEQ96PE7 176 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 RMDN3Q96TC7 470 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 SIKE1Q9BRV8 207 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-202ENST00000377865 RSAD1Q9HA92 442 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 KLHL11Q9NVR0 708 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF212Q9UDV6 495 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 CORO1CQ9ULV4 474 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-202ENST00000377865 PCDHA10Q9Y5I2 948 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 PI4K2BG5E9Z4 385 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 AHCYL1O43865 530 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 DGAT1O75907 488 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 PROSCO94903 275 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 KRT16P08779 473 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 ALADP13716 330 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 STMN1P16949 149 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 SDC4P31431 198 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 CDO1Q16878 200 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 INTS5Q6P9B9 1019 aaKnown RBP9.21□□□□□ -0.94
PCDH9-202ENST00000377865 RFX8Q6ZV50 586 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC97Q96F63 343 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-202ENST00000377865 MASTLQ96GX5 879 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 CRAMP1Q96RY5 1269 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC134Q9H6E4 229 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms