RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGN4-201ENST00000377575 POLIQ9UNA4 740 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 PRRG1O14668 218 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 EXTL3O43909 919 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 ABLIM3O94929 683 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 ASGR2P07307 311 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 TYMPP19971 482 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 LILRA4P59901 499 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 HFE2Q6ZVN8 426 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 HPS3Q969F9 1004 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 MFSD14AQ96MC6 490 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 CBWD1Q9BRT8 395 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 SCAND2PQ9GZW5 306 aaPredicted RBP18.21■□□□□ 0.51
HMGN4-201ENST00000377575 DPP3Q9NY33 737 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 EPS15L1Q9UBC2 864 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 USP25Q9UHP3 1055 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
HMGN4-201ENST00000377575 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 ANO9A1A5B4 782 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 PIRO00625 290 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 PPEF2O14830 753 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
HMGN4-201ENST00000377575 OAZ2O95190 189 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 LRG1P02750 347 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 SLFN14P0C7P3 912 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 CPB1P15086 417 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 ATF2P15336 505 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 PFKFB1P16118 471 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 FSHRP23945 695 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 CMA1P23946 247 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 AFMP43652 599 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 GRASPQ7Z6J2 395 aaPredicted RBP18.2■□□□□ 0.5
HMGN4-201ENST00000377575 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 GPD1LQ8N335 351 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 NOC3LQ8WTT2 800 aaKnown RBP18.2■□□□□ 0.5
HMGN4-201ENST00000377575 ZNF560Q96MR9 790 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 BLZF1Q9H2G9 400 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 IGSF9Q9P2J2 1179 aa18.2■□□□□ 0.5
HMGN4-201ENST00000377575 ZFP37Q9Y6Q3 630 aaPredicted RBP18.2■□□□□ 0.5
HMGN4-201ENST00000377575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 OR6C75A6NL08 312 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 TULP1O00294 542 aaPredicted RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 ACTN4O43707 911 aaKnown RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 TAF6P49848 677 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 EHHADHQ08426 723 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 EPM2AIP1Q7L775 607 aaPredicted RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 BMP8AQ7Z5Y6 402 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 MYADMQ96S97 322 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 PCIF1Q9H4Z3 704 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 CYP4F11Q9HBI6 524 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 AFF4Q9UHB7 1163 aaKnown RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 SERTAD1Q9UHV2 236 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 DSEQ9UL01 958 aa18.19■□□□□ 0.5
HMGN4-201ENST00000377575 TIMM13Q9Y5L4 95 aaPredicted RBP18.19■□□□□ 0.5
HMGN4-201ENST00000377575 NOTCH4Q99466 2003 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 KMT2EQ8IZD2 1858 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 A0A1B0GVL5 298 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 GOLGA8IPA6NC78 632 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 GOLGA8JA6NMD2 632 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 CASP1P29466 404 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 PNPLA4P41247 253 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
HMGN4-201ENST00000377575 TFAMQ00059 246 aaKnown RBP18.18■□□□□ 0.5
HMGN4-201ENST00000377575 TDGQ13569 410 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 CUL4BQ13620 913 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 SV2CQ496J9 727 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 PABPC1LQ4VXU2 614 aaKnown RBP18.18■□□□□ 0.5
HMGN4-201ENST00000377575 SUGP1Q8IWZ8 645 aaKnown RBP18.18■□□□□ 0.5
HMGN4-201ENST00000377575 ELMOD1Q8N336 334 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 ZSWIM2Q8NEG5 633 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 ZNF507Q8TCN5 953 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 NXPE3Q969Y0 559 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 PBXIP1Q96AQ6 731 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 KCNK12Q9HB15 430 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 KIAA1586Q9HCI6 787 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 RAPGEFL1Q9UHV5 662 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 INSL5Q9Y5Q6 135 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 ZNF318Q5VUA4 2279 aa18.18■□□□□ 0.5
HMGN4-201ENST00000377575 SPTLC1O15269 473 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 MYL1P05976 194 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 ADCY1Q08828 1119 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 MYBPC2Q14324 1141 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 METTL23Q86XA0 190 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 PAGE5Q96GU1 130 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 EXOC1Q9NV70 894 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 HSPBP1Q9NZL4 362 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 ITGA11Q9UKX5 1188 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 DUSP12Q9UNI6 340 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 HPSEQ9Y251 543 aa18.17■□□□□ 0.5
HMGN4-201ENST00000377575 ARIH1Q9Y4X5 557 aaPredicted RBP18.17■□□□□ 0.5
HMGN4-201ENST00000377575 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 CYP11A1P05108 521 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms