RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TATDN2Q93075 761 aa22.89■■□□□ 1.25
CBWD3-202ENST00000377342 IMPG2Q9BZV3 1241 aa22.89■■□□□ 1.25
CBWD3-202ENST00000377342 PLCB1Q9NQ66 1216 aa22.89■■□□□ 1.25
CBWD3-202ENST00000377342 APEX2Q9UBZ4 518 aa22.89■■□□□ 1.25
CBWD3-202ENST00000377342 POLIQ9UNA4 740 aa22.89■■□□□ 1.25
CBWD3-202ENST00000377342 ITIH6Q6UXX5 1313 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 B3GAT3O94766 335 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 MYOGP15173 224 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 PNPLA4P41247 253 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 ASPAP45381 313 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 TDHQ8IZJ6 230 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 ARID3AQ99856 593 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 TTYH3Q9C0H2 523 aa22.88■■□□□ 1.25
CBWD3-202ENST00000377342 MYO1EQ12965 1108 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 SV2CQ496J9 727 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 KLHDC7AQ5VTJ3 777 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 DCLRE1AQ6PJP8 1040 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 CHRDL2Q6WN34 429 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 FIBCD1Q8N539 461 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 COLGALT1Q8NBJ5 622 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 CLP1Q92989 425 aaKnown RBP22.87■■□□□ 1.25
CBWD3-202ENST00000377342 KAT5Q92993 513 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 NT5C1BQ96P26 610 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 NIF3L1Q9GZT8 377 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 FHOD1Q9Y613 1164 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 NT5C1B-RDH14C9J2C7 533 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 WDR72Q3MJ13 1102 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 ZNF667Q5HYK9 610 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 PCMTD1Q96MG8 357 aaPredicted RBP22.87■■□□□ 1.25
CBWD3-202ENST00000377342 KREMEN1Q96MU8 473 aa22.87■■□□□ 1.25
CBWD3-202ENST00000377342 YBX2Q9Y2T7 364 aaKnown RBP22.87■■□□□ 1.25
CBWD3-202ENST00000377342 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
CBWD3-202ENST00000377342 LINC01553A4QN01 128 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 KPNA7A9QM74 516 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 I3L4J1 428 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 UCHL3P15374 230 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 LAG3P18627 525 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 CDC25BP30305 580 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 BRCC3P46736 316 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 TIGD5Q53EQ6 642 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 WDR44Q5JSH3 913 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 SPECC1LQ69YQ0 1117 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 IQCEQ6IPM2 695 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 KCNT2Q6UVM3 1135 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 SCARA5Q6ZMJ2 495 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 SPRED2Q7Z698 418 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 NAA15Q9BXJ9 866 aaKnown RBP22.86■■□□□ 1.25
CBWD3-202ENST00000377342 SMYD3Q9H7B4 428 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 GDAP2Q9NXN4 497 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 NXF1Q9UBU9 619 aaKnown RBP22.86■■□□□ 1.25
CBWD3-202ENST00000377342 FAN1Q9Y2M0 1017 aa22.86■■□□□ 1.25
CBWD3-202ENST00000377342 CLSTN1O94985 981 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 EFEMP2O95967 443 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 ALDH2P05091 517 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 PBX2P40425 430 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 SPOUT1Q5T280 376 aaKnown RBP22.85■■□□□ 1.25
CBWD3-202ENST00000377342 RRAGAQ7L523 313 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 SLC39A11Q8N1S5 342 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 PPM1KQ8N3J5 372 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 CCDC150Q8NCX0 1101 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 NEK11Q8NG66 645 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 ZNF558Q96NG5 402 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 BCO2Q9BYV7 579 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 SDCBP2Q9H190 292 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 ADAM28Q9UKQ2 775 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 PCDHA11Q9Y5I1 949 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 SNX9Q9Y5X1 595 aa22.85■■□□□ 1.25
CBWD3-202ENST00000377342 GYPCP04921 128 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 CA3P07451 260 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 ALDH7A1P49419 539 aaKnown RBP22.84■■□□□ 1.25
CBWD3-202ENST00000377342 GCNT1Q02742 428 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 CUL2Q13617 745 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 TMC6Q7Z403 805 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 LIMS2Q7Z4I7 341 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 VN1R3Q9BXE9 311 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 FBXL5Q9UKA1 691 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 TRIOBPQ9H2D6 2365 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 TRIM21P19474 475 aaKnown RBP22.84■■□□□ 1.25
CBWD3-202ENST00000377342 RAP1GAPP47736 663 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 FIGNQ5HY92 759 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 UBR7Q8N806 425 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 IGSF21Q96ID5 467 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 SUSD3Q96L08 255 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 SENP8Q96LD8 212 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 COLEC11Q9BWP8 271 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 PBX4Q9BYU1 374 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 UBE2TQ9NPD8 197 aaPredicted RBP22.84■■□□□ 1.25
CBWD3-202ENST00000377342 DNAJC12Q9UKB3 198 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 L1RE1Q9UN81 338 aa22.84■■□□□ 1.25
CBWD3-202ENST00000377342 RNF225M0QZC1 329 aaPredicted RBP22.83■■□□□ 1.24
CBWD3-202ENST00000377342 M0QZQ0 153 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 POLR2FP61218 127 aaKnown RBP22.83■■□□□ 1.24
CBWD3-202ENST00000377342 TNNC1P63316 161 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 TBX2Q13207 712 aaPredicted RBP22.83■■□□□ 1.24
CBWD3-202ENST00000377342 SOWAHAQ2M3V2 549 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 FAXDC2Q96IV6 333 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 GPR62Q9BZJ7 368 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 GPR88Q9GZN0 384 aa22.83■■□□□ 1.24
CBWD3-202ENST00000377342 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.82■■□□□ 1.24
CBWD3-202ENST00000377342 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms