RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 LRRC49Q8IUZ0 686 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 RIBC1Q8N443 379 aaPredicted RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 CCDC127Q96BQ5 260 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 GM2AP17900 193 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 CCR3P51677 355 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 PPIDQ08752 370 aaKnown RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 UBE2Q1Q7Z7E8 422 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 PPFIBP2Q8ND30 876 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 NSRP1Q9H0G5 558 aaKnown RBP16.42■□□□□ 0.22
FXN-201ENST00000377270 GBA3Q9H227 469 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 MRGBPQ9NV56 204 aa16.42■□□□□ 0.22
FXN-201ENST00000377270 PDXKO00764 312 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 SLITRK3O94933 977 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 MMP13P45452 471 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 PDCD4Q53EL6 469 aaKnown RBP16.41■□□□□ 0.22
FXN-201ENST00000377270 RINT1Q6NUQ1 792 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 FRMD5Q7Z6J6 570 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.41■□□□□ 0.22
FXN-201ENST00000377270 ENDOVQ8N8Q3 282 aaKnown RBP16.41■□□□□ 0.22
FXN-201ENST00000377270 UTP4Q969X6 686 aaKnown RBP16.41■□□□□ 0.22
FXN-201ENST00000377270 PBKQ96KB5 322 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 NOX1Q9Y5S8 564 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 ZBTB39O15060 712 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 PSMD10O75832 226 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 PDE5AO76074 875 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 NMD3Q96D46 503 aaKnown RBP16.41■□□□□ 0.22
FXN-201ENST00000377270 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
FXN-201ENST00000377270 MRPL11Q9Y3B7 192 aaKnown RBP16.41■□□□□ 0.22
FXN-201ENST00000377270 KCNK3O14649 394 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 TTI1O43156 1089 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 DAPK3O43293 454 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 ACTN1P12814 892 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 IL4RP24394 825 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 KLRC1P26715 233 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 RXRGP48443 463 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 EMP3P54852 163 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 KCNA1Q09470 495 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 TTC39CQ8N584 583 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 RAB3IPQ96QF0 476 aaPredicted RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
FXN-201ENST00000377270 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 TUFT1Q9NNX1 390 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 LARSQ9P2J5 1176 aaKnown RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 CCPG1Q9ULG6 757 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 CLIC2O15247 247 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 GAS7O60861 476 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 AKAP3O75969 853 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 SLC9A1P19634 815 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 DCAF17Q5H9S7 520 aaPredicted RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 GABPB2Q8TAK5 448 aaPredicted RBP16.4■□□□□ 0.22
FXN-201ENST00000377270 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 HSPBAP1Q96EW2 488 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 GANQ9H2C0 597 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 ADAM7Q9H2U9 754 aa16.4■□□□□ 0.22
FXN-201ENST00000377270 FAM13AO94988 1023 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 NR3C1P04150 777 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 CAP2P40123 477 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 RPS6KA1Q15418 735 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 CEP55Q53EZ4 464 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 SPDYCQ5MJ68 293 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 ACTRT1Q8TDG2 376 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 INTS9Q9NV88 658 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 SNX3O60493 162 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 LYNP07948 512 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 VHLP40337 213 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 CASP4P49662 377 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 PPP2R5CQ13362 524 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 R3HDM1Q15032 1099 aaKnown RBP16.39■□□□□ 0.21
FXN-201ENST00000377270 ASIC2Q16515 512 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 LDHDQ86WU2 507 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 EHMT1Q9H9B1 1298 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 TRPC7Q9HCX4 862 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
FXN-201ENST00000377270 ASTN1O14525 1302 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms