RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 SNX9Q9Y5X1 595 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 ATP2A1O14983 1001 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 DYNC1LI2O43237 492 aaPredicted RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CTSHP09668 335 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 BRAFP15056 766 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 PTGER2P43116 358 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 PHKA2P46019 1235 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 FMO1Q01740 532 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 HHATQ5VTY9 493 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 SEPT1Q8WYJ6 367 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 ATXN7L3BQ96GX2 97 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 MMP19Q99542 508 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 MKNK1Q9BUB5 465 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 A0A087WZ62 844 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 RGL2O15211 777 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 SUPT20HL2P0C7V6 817 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 KCNJ2P63252 427 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CDR2Q01850 454 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 DARS2Q6PI48 645 aaKnown RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 EPM2AIP1Q7L775 607 aaPredicted RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CATSPER4Q7RTX7 472 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 C4orf19Q8IY42 314 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 NME8Q8N427 588 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CCNYQ8ND76 341 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 RNF34Q969K3 372 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 FDXACB1Q9BRP7 624 aaPredicted RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CEP41Q9BYV8 373 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 OSBPL8Q9BZF1 889 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 YIPF3Q9GZM5 350 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 R3HDM2Q9Y2K5 976 aaKnown RBP10.66□□□□□ -0.7
ZNF550-203ENST00000376230 NUB1Q9Y5A7 615 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 UBIAD1Q9Y5Z9 338 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 UBE4BO95155 1302 aa10.66□□□□□ -0.7
ZNF550-203ENST00000376230 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 A8MUI8 341 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 RASA4BC9J798 803 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 PIK3CDO00329 1044 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 RASA4O43374 803 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 UBOX5O94941 541 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 CREB1P16220 341 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 UBA1P22314 1058 aaKnown RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 CA4P22748 312 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 GLRA2P23416 452 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 DSG3P32926 999 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 GPC3P51654 580 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 ZNF131P52739 623 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 EEF1DP3Q658K8 133 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 NAIF1Q69YI7 327 aaPredicted RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 PRELID2Q8N945 189 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 C7orf43Q8WVR3 580 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 PPP1R12CQ9BZL4 782 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 ECT2Q9H8V3 914 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 G3BP2Q9UN86 482 aaKnown RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 NPTXRO95502 500 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 TCF4P15884 667 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 PCK1P35558 622 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 COILP38432 576 aaPredicted RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 IREB2P48200 963 aaKnown RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 WNT7BP56706 349 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 PDIA2Q13087 525 aaKnown RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
ZNF550-203ENST00000376230 KDELC2Q7Z4H8 507 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 TJP2Q9UDY2 1190 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 ADAMTS7Q9UKP4 1686 aa10.65□□□□□ -0.7
ZNF550-203ENST00000376230 SPDYE16A6NNV3 312 aaPredicted RBP10.65□□□□□ -0.71
ZNF550-203ENST00000376230 DHX15O43143 795 aaKnown RBP10.65□□□□□ -0.71
ZNF550-203ENST00000376230 ANP32DO95626 131 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 PDHA1P08559 390 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 DUOXA2Q1HG44 320 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 TRPM8Q7Z2W7 1104 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 LENG1Q96BZ8 264 aaPredicted RBP10.65□□□□□ -0.71
ZNF550-203ENST00000376230 KIF12Q96FN5 646 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 XPNPEP1Q9NQW7 623 aa10.65□□□□□ -0.71
ZNF550-203ENST00000376230 IGF2BP3O00425 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
ZNF550-203ENST00000376230 PHF2O75151 1096 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 ATP6V1G2O95670 118 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 RARBP10826 455 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 LCP1P13796 627 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 CUL2Q13617 745 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 ACAD10Q6JQN1 1059 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 LRIG3Q6UXM1 1119 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 TMEM35BQ8NCS4 154 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 CAMKK2Q96RR4 588 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 ADPGKQ9BRR6 497 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 MED10Q9BTT4 135 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 C12orf65Q9H3J6 166 aaKnown RBP10.64□□□□□ -0.71
ZNF550-203ENST00000376230 CCDC195A0A1B0GUA6 201 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 MIF4GDA9UHW6 222 aaKnown RBP10.64□□□□□ -0.71
ZNF550-203ENST00000376230 CHKAP35790 457 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 TAS2R40P59535 323 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 BPIFB4P59827 614 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 SEMA3FQ13275 785 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 EML3Q32P44 896 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 DCAF12L1Q5VU92 463 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 TTC27Q6P3X3 843 aa10.64□□□□□ -0.71
ZNF550-203ENST00000376230 TAOK1Q7L7X3 1001 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms