RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 NHEJ1Q9H9Q4 299 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 RSAD1Q9HA92 442 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 INPPL1O15357 1258 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 PYGBP11216 843 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 CYP3A5P20815 502 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 ACO1P21399 889 aaKnown RBP11.22□□□□□ -0.61
PDPN-203ENST00000376061 SCNN1GP51170 649 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 FAM189BP81408 668 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 KLHL30Q0D2K2 578 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 NAB2Q15742 525 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 ZNF667Q5HYK9 610 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 C9orf57Q5W0N0 161 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
PDPN-203ENST00000376061 CCDC170Q8IYT3 715 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 OLIG1Q8TAK6 271 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 JAKMIP2Q96AA8 810 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 VWCEQ96DN2 955 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 GOLGA2P5Q9HBQ8 144 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
PDPN-203ENST00000376061 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
PDPN-203ENST00000376061 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 NDUFA10O95299 355 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 EOMESO95936 686 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 KRT5P13647 590 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 LRPAP1P30533 357 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 RFC2P35250 354 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 USP8P40818 1118 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 KIF11P52732 1056 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 PTK2Q05397 1052 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 GRIK3Q13003 919 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 ASTE1Q2TB18 679 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 ZNF571Q7Z3V5 609 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 TRIM43Q96BQ3 446 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 ZNF560Q96MR9 790 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 SYT11Q9BT88 431 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 BCO2Q9BYV7 579 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 SDCBP2Q9H190 292 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 HAUS4Q9H6D7 363 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 SMYD3Q9H7B4 428 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 UBN1Q9NPG3 1134 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 SPTLC3Q9NUV7 552 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 TMEM161AQ9NX61 479 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 CACNG4Q9UBN1 327 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 INPP5FQ9Y2H2 1132 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 REXO2Q9Y3B8 237 aaKnown RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
PDPN-203ENST00000376061 BZW2Q9Y6E2 419 aaKnown RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
PDPN-203ENST00000376061 COL4A6Q14031 1691 aa11.21□□□□□ -0.62
PDPN-203ENST00000376061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 USP27XA6NNY8 438 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 PIRO00625 290 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ENPP3O14638 875 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ZNF263O14978 683 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CYP26A1O43174 497 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 OFD1O75665 1012 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 TIMP1P01033 207 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 THP07101 528 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CCDC172P0C7W6 258 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ITGB8P26012 769 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ANXA13P27216 316 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CLCN1P35523 988 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ZNF132P52740 706 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 TNNC1P63316 161 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 MYO1EQ12965 1108 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 WDR72Q3MJ13 1102 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CNKSR3Q6P9H4 555 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 SLC47A2Q86VL8 602 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 RBBP8NLQ8NC74 664 aaPredicted RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 EPS8L1Q8TE68 723 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 SLC20A1Q8WUM9 679 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 CCDC42Q96M95 316 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms