RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SNX12Q9UMY4 172 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 PIN4Q9Y237 131 aaKnown RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 PCDHB4Q9Y5E5 795 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 INPPL1O15357 1258 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 FTLP02792 175 aaPredicted RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 UQCRHP07919 91 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 SKIP12755 728 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 KRT5P13647 590 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 PNPLA4P41247 253 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 DSC3Q14574 896 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 GLIPR1L2Q4G1C9 344 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 C11orf63Q6NUN7 778 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 PHF13Q86YI8 300 aaPredicted RBP11.89□□□□□ -0.51
PDPN-202ENST00000376057 HACE1Q8IYU2 909 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 GLT1D1Q96MS3 346 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 LHX5Q9H2C1 402 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 STXBP5LQ9Y2K9 1186 aa11.89□□□□□ -0.51
PDPN-202ENST00000376057 GRID2IPA4D2P6 1211 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 RPS6KA5O75582 802 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 LRPAP1P30533 357 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 USP8P40818 1118 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 FBXO47Q5MNV8 452 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
PDPN-202ENST00000376057 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
PDPN-202ENST00000376057 ST3GAL5Q9UNP4 418 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 IPPQ9Y573 584 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 UMODL1Q5DID0 1318 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 PIRO00625 290 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 ATP1A1P05023 1023 aaKnown RBP11.88□□□□□ -0.51
PDPN-202ENST00000376057 ITGB3P05106 788 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 CAPN2P17655 700 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 GNA15P30679 374 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 CDK7P50613 346 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 SLC35G2Q8TBE7 412 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 WNT8BQ93098 351 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 HPDLQ96IR7 371 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 UBN1Q9NPG3 1134 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
PDPN-202ENST00000376057 DNM1LO00429 736 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 MED7O43513 233 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 CILPO75339 1184 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 PALMO75781 387 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 RECQL4O94761 1208 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 GSCP56915 257 aaPredicted RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 CHMP4BP1P59074 171 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 CKAP4Q07065 602 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 TLR10Q9BXR5 811 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDPN-202ENST00000376057 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 SMIM28A0A1B0GU29 152 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 TADA3O75528 432 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 MNS1Q8NEH6 495 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 ZNF606Q8WXB4 792 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 FAM84AQ96KN4 292 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 RPS6KC1Q96S38 1066 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 ZMYND15Q9H091 742 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 THAP2Q9H0W7 228 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 SLC38A7Q9NVC3 462 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 PTCH2Q9Y6C5 1203 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 ARVCFO00192 962 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 STILQ15468 1287 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 C9orf57Q5W0N0 161 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 CAGE1Q8TC20 777 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 PPP1R10Q96QC0 940 aaKnown RBP11.87□□□□□ -0.51
PDPN-202ENST00000376057 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
PDPN-202ENST00000376057 NOMO3P69849 1222 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 WDR72Q3MJ13 1102 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 MON1BQ7L1V2 547 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 DPH6Q7L8W6 267 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 MCOLN2Q8IZK6 566 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 HES6Q96HZ4 224 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 PBKQ96KB5 322 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 OGDHLQ9ULD0 1010 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
PDPN-202ENST00000376057 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 THPOP40225 353 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms