RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CST3P01034 146 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 CYP1A1P04798 512 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 RRM1P23921 792 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 MAPK4P31152 587 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 SSTR3P32745 418 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 PTGIRP43119 386 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 EFNA5P52803 228 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 PPIL2Q13356 520 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 DUPD1Q68J44 220 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 LLGL2Q6P1M3 1020 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 COPS5Q92905 334 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 THOC1Q96FV9 657 aaKnown RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 TRIM7Q9C029 511 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 CCDC113Q9H0I3 377 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 ACTR5Q9H9F9 607 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 BCCIPQ9P287 314 aaKnown RBP eCLIP14.88□□□□□ -0.03
MSH5-202ENST00000375740 SLC12A6Q9UHW9 1150 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 TRAPPC3O43617 180 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 CLTAP09496 248 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 OSBPP22059 807 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 CHRNA3P32297 505 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 GBP2P32456 591 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 RWDD2BP57060 319 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 NCOA4Q13772 614 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 TTC27Q6P3X3 843 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 SLC13A5Q86YT5 568 aaPredicted RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 JAMLQ86YT9 394 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 RNF149Q8NC42 400 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 SPATA33Q96N06 139 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 ACO2Q99798 780 aaKnown RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 MRPL4Q9BYD3 311 aaKnown RBP14.88□□□□□ -0.03
MSH5-202ENST00000375740 MROH7Q68CQ1 1323 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 HMGB1P1B2RPK0 211 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 FAM189A1O60320 539 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 TOM1L1O75674 476 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 NSFP46459 744 aaKnown RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 NOP14P78316 857 aaKnown RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 BIRC2Q13490 618 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 PLPPR4Q7Z2D5 763 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 BRSK2Q8IWQ3 736 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 SPON1Q9HCB6 807 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 AVENQ9NQS1 362 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
MSH5-202ENST00000375740 BAIAP2L1Q9UHR4 511 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 PPME1Q9Y570 386 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 IGKV6-21A0A0C4DH24 114 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 H0YGN5 161 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 MGRN1O60291 552 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 CENPCQ03188 943 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 C9orf131Q5VYM1 1079 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 CCDC62Q6P9F0 684 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.87□□□□□ -0.03
MSH5-202ENST00000375740 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 ABRAQ8N0Z2 381 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 TRAPPC12Q8WVT3 735 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 UBLCP1Q8WVY7 318 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 RAPGEF5Q92565 580 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 ZNF668Q96K58 619 aaPredicted RBP14.87□□□□□ -0.03
MSH5-202ENST00000375740 SNX24Q9Y343 169 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 L3MBTL1Q9Y468 752 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 NFS1Q9Y697 457 aa14.87□□□□□ -0.03
MSH5-202ENST00000375740 A0A1B0GUA9 196 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 PRKCBP05771 671 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 RARAP10276 462 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 TBXAS1P24557 533 aaPredicted RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 GNA15P30679 374 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 DHX9Q08211 1270 aaKnown RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 LLGL1Q15334 1064 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 CDCA2Q69YH5 1023 aaPredicted RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 LRIG3Q6UXM1 1119 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 TMC3Q7Z5M5 1100 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 RHPN2Q8IUC4 686 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 ZBTB8OSQ8IWT0 167 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 PDGFCQ9NRA1 345 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 PCYOX1Q9UHG3 505 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 CNTN6Q9UQ52 1028 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 MCM3APO60318 1980 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 MYBL1P10243 752 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 TXNP10599 105 aaKnown RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 ELF3P78545 371 aaPredicted RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 XRCC4Q13426 336 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 MAPK6Q16659 721 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 HIBCHQ6NVY1 386 aaPredicted RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 CCDC137Q6PK04 289 aaKnown RBP14.86□□□□□ -0.03
MSH5-202ENST00000375740 MON1BQ7L1V2 547 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 MAGEC3Q8TD91 643 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 NOD2Q9HC29 1040 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 ZDHHC18Q9NUE0 388 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms