RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF577Q9BSK1 485 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 SLC38A10Q9HBR0 1119 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 GRHL1Q9NZI5 618 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 COL4A3BPQ9Y5P4 624 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 LAD1O00515 517 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 GAS7O60861 476 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 GH1P01241 217 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 ETS2P15036 469 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 CREB1P16220 341 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 TAC1P20366 129 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 IREB2P48200 963 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 PTK2Q05397 1052 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 AP3B2Q13367 1082 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 KLC3Q6P597 504 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 SPATA24Q86W54 205 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 CATSPER2Q96P56 530 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 BLOC1S4Q9NUP1 217 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 KRT36O76013 467 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CBX6O95503 412 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 SREBF1P36956 1147 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 PFASO15067 1338 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 PSME4Q14997 1843 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 TMEM221A6NGB7 291 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 PSMG1O95456 288 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 HOXA7P31268 230 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 WDR60Q8WVS4 1066 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CLEC4DQ8WXI8 215 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 DDX12PQ92771 950 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 LNPEPQ9UIQ6 1025 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 VAV1P15498 845 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 RPL21P46778 160 aaKnown RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CEP55Q53EZ4 464 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 UBAP2Q5T6F2 1119 aaKnown RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 GPBP1Q86WP2 473 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 SYTL5Q8TDW5 730 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-203ENST00000375315 LENG9Q96B70 501 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 GLT8D2Q9H1C3 349 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
C9orf3-203ENST00000375315 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.353e-11■■■□□ 16.8
C9orf3-203ENST00000375315 TBX10O75333 385 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 E2F6O75461 281 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 CYP2C8P10632 490 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ITGB5P18084 799 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ANXA13P27216 316 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 CHRNA3P32297 505 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 COPB2P35606 906 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
C9orf3-203ENST00000375315 SULT2A1Q06520 285 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 DYDC2Q96IM9 177 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 BHMT2Q9H2M3 363 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 PCDH18Q9HCL0 1135 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 SAR1AQ9NR31 198 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ANGPTL2Q9UKU9 493 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 SH3GLB1Q9Y371 365 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-203ENST00000375315 PABPC4LP0CB38 370 aaKnown RBP12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ZFXP17010 805 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-203ENST00000375315 HSPA6P17066 643 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 SERPINB3P29508 390 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 TMED1Q13445 227 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 P3H1Q32P28 736 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 WDR72Q3MJ13 1102 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ABTB1Q969K4 478 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-203ENST00000375315 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 ZFP69BQ9UJL9 534 aa12.85□□□□□ -0.35
C9orf3-203ENST00000375315 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms