RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NR2F2P24468 414 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 POLR2BP30876 1174 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MORC3Q14149 939 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MRPL58Q14197 206 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 DUOXA2Q1HG44 320 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CEP135Q66GS9 1140 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SYCE2Q6PIF2 218 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 RSPO2Q6UXX9 243 aaPredicted RBP22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ANKS3Q6ZW76 656 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 WDR49Q8IV35 697 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 APPL2Q8NEU8 664 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PLEKHO2Q8TD55 490 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 BORCS6Q96GS4 357 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SENP8Q96LD8 212 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CGRRF1Q99675 332 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SIX4Q9UIU6 781 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TIMM13Q9Y5L4 95 aaPredicted RBP22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 BACE2Q9Y5Z0 518 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TNNC2P02585 160 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CD44P16070 742 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TNNI1P19237 187 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 RPL13P26373 211 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TAF6P49848 677 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 RBP5P82980 135 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ADAM9Q13443 819 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CENPPQ6IPU0 288 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PTCRAQ6ISU1 281 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 LILRA6Q6PI73 481 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ZNF516Q92618 1163 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 NECAB3Q96P71 396 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 S1PR5Q9H228 398 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CLSTN2Q9H4D0 955 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 KIAA1468Q9P260 1216 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ITGA11Q9UKX5 1188 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 FRMD4BQ9Y2L6 1034 aa22.65■■□□□ 1.22
MAP1LC3A-202ENST00000374837 GRXCR2A6NFK2 248 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 H7C4K7 107 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TGM5O43548 720 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TBC1D4O60343 1298 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 GLUD1P00367 558 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SPATA31D3P0C874 917 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 HOXB8P17481 243 aaPredicted RBP22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 OR1D2P34982 312 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 EDRF1Q3B7T1 1238 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PUS10Q3MIT2 529 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SPATA31D4Q6ZUB0 917 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 C12orf76Q8N812 135 aaPredicted RBP22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PARD3BQ8TEW8 1205 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 APOL5Q9BWW9 433 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 DZANK1Q9NVP4 752 aa22.64■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PPP1R3GB7ZBB8 358 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 GOLGA6L22H0YM25 854 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 MBTPS2O43462 519 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 AKAP3O75969 853 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 C1RP00736 705 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 KRT19P08727 400 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TYMPP19971 482 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PMS1P54277 932 aaKnown RBP22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SMAD4Q13485 552 aaKnown RBP22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 RAB33AQ14088 237 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ANKRD40Q6AI12 368 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TRAPPC11Q7Z392 1133 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SMRP1Q8NCR6 262 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 DHTKD1Q96HY7 919 aaPredicted RBP22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ZNF560Q96MR9 790 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 C1QTNF1Q9BXJ1 281 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CDY1Q9Y6F8 540 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 REV3LO60673 3130 aa22.63■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PDCD11Q14690 1871 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 LRRIQ3A6PVS8 624 aaPredicted RBP22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 KPNA7A9QM74 516 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CYB561D2O14569 222 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 MAPK13O15264 365 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 OAZ2O95190 189 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PNPLA4P41247 253 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 STIM1Q13586 685 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SV2CQ496J9 727 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CTXN3Q4LDR2 81 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 USP37Q86T82 979 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 LRRC52Q8N7C0 313 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 GPT2Q8TD30 523 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TMC2Q8TDI7 906 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TSG101Q99816 390 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 MAN1C1Q9NR34 630 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FBXL5Q9UKA1 691 aa22.62■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TRIM49BA6NDI0 452 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ODC1P11926 461 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 IL9P15248 144 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ANK1P16157 1881 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CCNE1P24864 410 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PSMC2P35998 433 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PPP1R2P41236 205 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 DLG4P78352 724 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CLDN10P78369 228 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 YWHAHQ04917 246 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 RARS2Q5T160 578 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SLC8B1Q6J4K2 584 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ZNF280DQ6N043 979 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TRIML1Q8N9V2 468 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 KREMEN2Q8NCW0 462 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms