RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 GPRASP2Q96D09 838 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 CTNNAL1Q9UBT7 734 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 NFASCO94856 1347 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 PARP14Q460N5 1801 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 VWA5AO00534 786 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 KLRC2P26717 231 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 TRIP13Q15645 432 aaPredicted RBP19.04■□□□□ 0.64
PHF1-201ENST00000374512 PLEKHA7Q6IQ23 1121 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 BSNDQ8WZ55 320 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 CEP170P1Q96L14 293 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 PDLIM7Q9NR12 457 aa19.04■□□□□ 0.64
PHF1-201ENST00000374512 FAM47DPA6NHR8 397 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 MAGEB2O15479 319 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 C1QBPQ07021 282 aaKnown RBP19.03■□□□□ 0.64
PHF1-201ENST00000374512 BAATQ14032 418 aaPredicted RBP19.03■□□□□ 0.64
PHF1-201ENST00000374512 E2F5Q15329 346 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 TLDC1Q6P9B6 456 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 ANKS1BQ7Z6G8 1248 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 VSIG10LQ86VR7 867 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 FAM213AQ9BRX8 229 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 RNF146Q9NTX7 359 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 SENP1Q9P0U3 644 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 KIAA1217Q5T5P2 1943 aa19.03■□□□□ 0.64
PHF1-201ENST00000374512 LOC102724159A0A0B4J2E5 919 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ATP5HO75947 161 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 CCNB1P14635 433 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 CCND1P24385 295 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 MAGEA4P43358 317 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 MAMLD1Q13495 774 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 PWP2Q15269 919 aaKnown RBP19.02■□□□□ 0.64
PHF1-201ENST00000374512 LLGL1Q15334 1064 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ASRGL1Q7L266 308 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 RCOR2Q8IZ40 523 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ABRAQ8N0Z2 381 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 CYP4X1Q8N118 509 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 MAML1Q92585 1016 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 N4BP2L2Q92802 583 aaPredicted RBP19.02■□□□□ 0.64
PHF1-201ENST00000374512 FNBP1Q96RU3 617 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 PI4K2AQ9BTU6 479 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ADAM22Q9P0K1 906 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ARHGAP28Q9P2N2 729 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 GABBR1Q9UBS5 961 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ARID2Q68CP9 1835 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 GSTTP1A0A1W2PQM5 241 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ZBTB7AO95365 584 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 NR3C2P08235 984 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 RGS9BPQ6ZS82 235 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 SRRM1Q8IYB3 904 aaKnown RBP19.02■□□□□ 0.64
PHF1-201ENST00000374512 FITM2Q8N6M3 262 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ZNF516Q92618 1163 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 ATG4CQ96DT6 458 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 BICD1Q96G01 975 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 RBM41Q96IZ5 413 aaKnown RBP19.02■□□□□ 0.64
PHF1-201ENST00000374512 RBM15Q96T37 977 aaKnown RBP eCLIP19.02■□□□□ 0.64
PHF1-201ENST00000374512 HEMGNQ9BXL5 484 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 CNTN6Q9UQ52 1028 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 STYXL1Q9Y6J8 313 aa19.02■□□□□ 0.64
PHF1-201ENST00000374512 RASA4BC9J798 803 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 IGF2BP3O00425 579 aaKnown RBP eCLIP19.01■□□□□ 0.63
PHF1-201ENST00000374512 PRPF4O43172 522 aaKnown RBP eCLIP19.01■□□□□ 0.638e-8■■■■□ 21.5
PHF1-201ENST00000374512 RASA4O43374 803 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 GH1P01241 217 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 C4BPAP04003 597 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 TAC1P20366 129 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 ACO1P21399 889 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 NOMO3P69849 1222 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 RASA2Q15283 850 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 MICALL2Q8IY33 904 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 GDAP1Q8TB36 358 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 RSRC1Q96IZ7 334 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 PARVAQ9NVD7 372 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 IP6K2Q9UHH9 426 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 STARD13Q9Y3M8 1113 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 DOCK1Q14185 1865 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 KIF1CO43896 1103 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 HLA-DRAP01903 254 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 TBXAS1P24557 533 aaPredicted RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 ALDH5A1P51649 535 aaPredicted RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 KCNJ2P63252 427 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 MCL1Q07820 350 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 SF3A3Q12874 501 aaKnown RBP eCLIP19.01■□□□□ 0.635e-12■■■■■ 29.8
PHF1-201ENST00000374512 LRRC38Q5VT99 294 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 GSTA5Q7RTV2 222 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 FBF1Q8TES7 1133 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 PITPNM3Q9BZ71 974 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 SMG5Q9UPR3 1016 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 DRG1Q9Y295 367 aaKnown RBP19.01■□□□□ 0.63
PHF1-201ENST00000374512 RIPK3Q9Y572 518 aa19.01■□□□□ 0.63
PHF1-201ENST00000374512 ZNF862O60290 1169 aa19■□□□□ 0.63
PHF1-201ENST00000374512 STBD1O95210 358 aa19■□□□□ 0.63
PHF1-201ENST00000374512 CETPP11597 493 aa19■□□□□ 0.63
PHF1-201ENST00000374512 GMPSP49915 693 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 SLC8A3P57103 927 aa19■□□□□ 0.63
PHF1-201ENST00000374512 CUL2Q13617 745 aa19■□□□□ 0.63
PHF1-201ENST00000374512 SMYD5Q6GMV2 418 aa19■□□□□ 0.63
PHF1-201ENST00000374512 L3MBTL3Q96JM7 780 aaPredicted RBP19■□□□□ 0.63
PHF1-201ENST00000374512 TXLNGQ9NUQ3 528 aa19■□□□□ 0.63
PHF1-201ENST00000374512 DNAJC17Q9NVM6 304 aaKnown RBP19■□□□□ 0.63
PHF1-201ENST00000374512 NOP53Q9NZM5 478 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms