RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OATP04181 439 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 SHBGP04278 402 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TNNI1P19237 187 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CETN2P41208 172 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 KRT17Q04695 432 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 MTERF2Q49AM1 385 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TNFAIP8L3Q5GJ75 292 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 RNF187Q5TA31 235 aaPredicted RBP14.84□□□□□ -0.03
HMGCL-203ENST00000374490 MON1BQ7L1V2 547 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CNPY4Q8N129 248 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 DNERQ8NFT8 737 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 OPTNQ96CV9 577 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 PORCNQ9H237 461 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 CCDC134Q9H6E4 229 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TMEM134Q9H6X4 195 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 ZNF302Q9NR11 478 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
HMGCL-203ENST00000374490 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 SORBS3O60504 671 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CUL2Q13617 745 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 MMS22LQ6ZRQ5 1243 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 FASTKD5Q7L8L6 764 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 PHF13Q86YI8 300 aaPredicted RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 ABRAQ8N0Z2 381 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CHST13Q8NET6 341 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 ATL2Q8NHH9 583 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF516Q92618 1163 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 SEC16BQ96JE7 1060 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CABS1Q96KC9 395 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 PI4K2AQ9BTU6 479 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 NIFKQ9BYG3 293 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 FOXP3Q9BZS1 431 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 NSRP1Q9H0G5 558 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 SEMA4AQ9H3S1 761 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 DHX33Q9H6R0 707 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 A1CFQ9NQ94 594 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 ASIC3Q9UHC3 531 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CHORDC1Q9UHD1 332 aaPredicted RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 AGTPBP1Q9UPW5 1226 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 CNTN6Q9UQ52 1028 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 MAFBQ9Y5Q3 323 aaPredicted RBP14.83□□□□□ -0.04
HMGCL-203ENST00000374490 MROH7Q68CQ1 1323 aa14.83□□□□□ -0.04
HMGCL-203ENST00000374490 GOLGA6L7A0A1B0GV03 622 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 TLDC2A0PJX2 215 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 FAM170AA1A519 330 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 DCDC2CA8MYV0 355 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 ATF2P15336 505 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 DRD4P21917 467 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 RRM1P23921 792 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 ARL2P36404 184 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 LMNB2Q03252 620 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 STXBP2Q15833 593 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF568Q3ZCX4 644 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 TDRD10Q5VZ19 366 aaKnown RBP14.82□□□□□ -0.04
HMGCL-203ENST00000374490 RHBDF2Q6PJF5 856 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 SUGP1Q8IWZ8 645 aaKnown RBP14.82□□□□□ -0.04
HMGCL-203ENST00000374490 KATNAL2Q8IYT4 538 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 CCHCR1Q8TD31 782 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 DDX27Q96GQ7 796 aaKnown RBP14.82□□□□□ -0.04
HMGCL-203ENST00000374490 SERPINB12Q96P63 405 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
HMGCL-203ENST00000374490 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 PTPN22Q9Y2R2 807 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 CAPN7Q9Y6W3 813 aa14.82□□□□□ -0.04
HMGCL-203ENST00000374490 H0YHG0 523 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 K7ERI5 159 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 IGF2BP3O00425 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 NDC80O14777 642 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ASAP2O43150 1006 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CLTAP09496 248 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 GHRP10912 638 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CHN1P15882 459 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ACO1P21399 889 aaKnown RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 FGFR4P22455 802 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 NOMO3P69849 1222 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ACTN3Q08043 901 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 IFT88Q13099 833 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 SLC7A3Q8WY07 619 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 TRAIPQ9BWF2 469 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 PCDHB4Q9Y5E5 795 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 A0A0B4J269 797 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 TCEA3O75764 348 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 OSBPP22059 807 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 GLRA2P23416 452 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 GNA15P30679 374 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 KCNJ1P48048 391 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 NLRP11P59045 1033 aaKnown RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 SNAPC2Q13487 334 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 AUHQ13825 339 aaKnown RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CCNG2Q16589 344 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 LACTB2Q53H82 288 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 FAM160B1Q5W0V3 765 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms