RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NFIAQ12857 509 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 SGSM1Q2NKQ1 1148 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 PPFIA2O75334 1257 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 PRKCBP05771 671 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 TYK2P29597 1187 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 AGBL1Q96MI9 1066 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 SPAG6O75602 509 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 RPL21P46778 160 aaKnown RBP18.32■□□□□ 0.52
PTPRU-202ENST00000373779 SLC12A3P55017 1021 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 PRKCEQ02156 737 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 EAPPQ56P03 285 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-202ENST00000373779 ANO5Q75V66 913 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 SLC47A2Q86VL8 602 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 ICA1LQ8NDH6 482 aa18.32■□□□□ 0.52
PTPRU-202ENST00000373779 LBHD1Q9BQE6 289 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-202ENST00000373779 RFC1P35251 1148 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 SPDYCQ5MJ68 293 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 KLC3Q6P597 504 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 SH3BP5O60239 455 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 CST8O60676 142 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 APRTP07741 180 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 ARP10275 920 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 ITGB3BPQ13352 177 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 IL1R1P14778 569 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 KRT4P19013 534 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 GTF2H1P32780 548 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 DPP9Q86TI2 863 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 NR3C2P08235 984 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 IRX1P78414 480 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 TMEM154Q6P9G4 183 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 CCDC124Q96CT7 223 aaKnown RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 NSL1Q96IY1 281 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 ANLNQ9NQW6 1124 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 GEMIN8Q9NWZ8 242 aaKnown RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 ERFP50548 548 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 AP1B1Q10567 949 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 MTMR2Q13614 643 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 CUL3Q13618 768 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 VPS72Q15906 364 aa18.31■□□□□ 0.52
PTPRU-202ENST00000373779 YTHDF3Q7Z739 585 aaKnown RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 SUDS3Q9H7L9 328 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-202ENST00000373779 STX3Q13277 289 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 CRYMQ14894 314 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 COBLL1Q53SF7 1204 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 C4orf32Q8N8J7 132 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 SH3GL3Q99963 347 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 GPRC5CQ9NQ84 441 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 MARCOQ9UEW3 520 aaPredicted RBP18.3■□□□□ 0.52
PTPRU-202ENST00000373779 TAC1P20366 129 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 BAG6P46379 1132 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 CUL2Q13617 745 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 STAMBPL1Q96FJ0 436 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 PGM2Q96G03 612 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 CREB3O43889 395 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 WEE2P0C1S8 567 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 PRKCIP41743 596 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 MRPS35P82673 323 aaKnown RBP18.3■□□□□ 0.52
PTPRU-202ENST00000373779 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 FAM151AQ8WW52 585 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 DHX38Q92620 1227 aaKnown RBP18.3■□□□□ 0.52
PTPRU-202ENST00000373779 C17orf75Q9HAS0 396 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 ZNF70Q9UC06 446 aaPredicted RBP18.3■□□□□ 0.52
PTPRU-202ENST00000373779 HAO1Q9UJM8 370 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 MTM1Q13496 603 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 SMAD1Q15797 465 aaKnown RBP18.3■□□□□ 0.52
PTPRU-202ENST00000373779 SMTNL2Q2TAL5 461 aa18.3■□□□□ 0.52
PTPRU-202ENST00000373779 SPATA18Q8TC71 538 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 BTNL10A8MVZ5 291 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 HSPA8P11142 646 aaKnown RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 PDGFRAP16234 1089 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 KCNA3P22001 575 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 SHMT1P34896 483 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 STAT5BP51692 787 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 IFI35P80217 286 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 GANQ9H2C0 597 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 RXFP1Q9HBX9 757 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 SRRM3A6NNA2 597 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 KRT10P13645 584 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 CTCFP49711 727 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 C2CD6Q53TS8 623 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 PCMTD2Q9NV79 361 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 B2RBV5 119 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 OATP04181 439 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 SNRPAP09012 282 aaKnown RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 TTC39BQ5VTQ0 682 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 METTL23Q86XA0 190 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 ABTB1Q969K4 478 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
PTPRU-202ENST00000373779 BFARQ9NZS9 450 aa18.29■□□□□ 0.52
PTPRU-202ENST00000373779 RRM1P23921 792 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms