RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 TDRD10Q5VZ19 366 aaKnown RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 SV2AQ7L0J3 742 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 RNF168Q8IYW5 571 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 LRRC52Q8N7C0 313 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 MRPL43Q8N983 215 aaKnown RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 HPDLQ96IR7 371 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 SENP8Q96LD8 212 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 NSUN3Q9H649 340 aaKnown RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 IGFLR1Q9H665 355 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 TLE6Q9H808 572 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 CHST7Q9NS84 486 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 SSX2IPQ9Y2D8 614 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 TRANK1O15050 2925 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 SZT2Q5T011 3432 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 CYB561D2O14569 222 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 FGFR3P22607 806 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 MYL6P60660 151 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 DSG1Q02413 1049 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 HSP90AA4PQ58FG1 418 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 TCEAL5Q5H9L2 206 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 RTP2Q5QGT7 225 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 PRSS55Q6UWB4 352 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-201ENST00000373667 CXorf38Q8TB03 319 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 ENOX1Q8TC92 643 aaKnown RBP20.46■□□□□ 0.87
COL16A1-201ENST00000373667 PPP2R3CQ969Q6 453 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 NAT10Q9H0A0 1025 aaKnown RBP20.46■□□□□ 0.87
COL16A1-201ENST00000373667 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-201ENST00000373667 PCDHB8Q9UN66 801 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 TIMM13Q9Y5L4 95 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-201ENST00000373667 SCN1AP35498 2009 aa20.46■□□□□ 0.87
COL16A1-201ENST00000373667 C2orf71A6NGG8 1288 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 PER2O15055 1255 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 GTF2H1P32780 548 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 MTIF2P46199 727 aaKnown RBP20.45■□□□□ 0.86
COL16A1-201ENST00000373667 NRIP1P48552 1158 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 NCOA4Q13772 614 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 PTPN14Q15678 1187 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 ZACNQ401N2 412 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 ADGRD2Q7Z7M1 963 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 APPL2Q8NEU8 664 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 CNOT6LQ96LI5 555 aaKnown RBP20.45■□□□□ 0.86
COL16A1-201ENST00000373667 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 TMEM8AQ9HCN3 771 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 NFE2L3Q9Y4A8 694 aa20.45■□□□□ 0.86
COL16A1-201ENST00000373667 MYO7AQ13402 2215 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 M0QZQ0 153 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 SYN3O14994 580 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 VNN1O95497 513 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 HLA-DRAP01903 254 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 ODC1P11926 461 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 KLRC2P26717 231 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 PIK3CAP42336 1068 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL16A1-201ENST00000373667 PSMD5Q16401 504 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 KRT39Q6A163 491 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 PDXDC1Q6P996 788 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 METTL23Q86XA0 190 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 GLYCTKQ8IVS8 523 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 EMILIN2Q9BXX0 1053 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL16A1-201ENST00000373667 SAMSN1Q9NSI8 373 aaKnown RBP20.44■□□□□ 0.86
COL16A1-201ENST00000373667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL16A1-201ENST00000373667 SNX9Q9Y5X1 595 aa20.44■□□□□ 0.86
COL16A1-201ENST00000373667 ARHGEF37A1IGU5 675 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 H7C4K7 107 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 HUS1O60921 280 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 LILRB3O75022 631 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 RPL17P18621 184 aaKnown RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 MXI1P50539 228 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 MCCD1P59942 119 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 SKIV2LQ15477 1246 aaKnown RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 VARS2Q5ST30 1063 aaKnown RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 C15orf39Q6ZRI6 1047 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 ANKS3Q6ZW76 656 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 IRF2BP1Q8IU81 584 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 TRIM59Q8IWR1 403 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 AOPEPQ8N6M6 819 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 LNX1Q8TBB1 728 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 PIK3R5Q8WYR1 880 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 SLC35C1Q96A29 364 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 ELMO3Q96BJ8 720 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 KLHL5Q96PQ7 755 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 MMS19Q96T76 1030 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 FUCA2Q9BTY2 467 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 NXF1Q9UBU9 619 aaKnown RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 IRAK3Q9Y616 596 aa20.43■□□□□ 0.86
COL16A1-201ENST00000373667 PRRC2BQ5JSZ5 2229 aaKnown RBP20.43■□□□□ 0.86
COL16A1-201ENST00000373667 CNPP09543 421 aaKnown RBP20.42■□□□□ 0.86
COL16A1-201ENST00000373667 ATICP31939 592 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 GTF2F1P35269 517 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL16A1-201ENST00000373667 MARSP56192 900 aaKnown RBP20.42■□□□□ 0.86
COL16A1-201ENST00000373667 MYL5Q02045 173 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 KCNH2Q12809 1159 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 SGSM1Q2NKQ1 1148 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 ZNF699Q32M78 642 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 WDR72Q3MJ13 1102 aa20.42■□□□□ 0.86
COL16A1-201ENST00000373667 EP400NLQ6ZTU2 488 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms