RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CTSAP10619 480 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 GCLMP48507 274 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 AARSP49588 968 aaKnown RBP eCLIP19.97■□□□□ 0.79
CDX4-201ENST00000373514 LILRA4P59901 499 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 TCERG1LQ5VWI1 586 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.97■□□□□ 0.79
CDX4-201ENST00000373514 EYSQ5T1H1 3165 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 C4BPAP04003 597 aaKnown RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 URODP06132 367 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 POU3F3P20264 500 aaPredicted RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 GTF2F1P35269 517 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDX4-201ENST00000373514 TAF6P49848 677 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 TPM4P67936 248 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 PLCB2Q00722 1185 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 SMC1AQ14683 1233 aaKnown RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 CCDC85BQ15834 202 aaPredicted RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 USP41Q3LFD5 358 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 TCEAL5Q5H9L2 206 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 ENOX1Q8TC92 643 aaKnown RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 SLC35C1Q96A29 364 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 SUSD3Q96L08 255 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 CNOT6LQ96LI5 555 aaKnown RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 ZNF560Q96MR9 790 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 CHST7Q9NS84 486 aa19.96■□□□□ 0.79
CDX4-201ENST00000373514 ARMCX3Q9UH62 379 aaPredicted RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 TIMM13Q9Y5L4 95 aaPredicted RBP19.96■□□□□ 0.79
CDX4-201ENST00000373514 C2orf71A6NGG8 1288 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 AP5Z1O43299 807 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 CST3P01034 146 aaPredicted RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 RPL17P18621 184 aaKnown RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 FGFR3P22607 806 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 DSG1Q02413 1049 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 TPD52L1Q16890 204 aaPredicted RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 C15orf39Q6ZRI6 1047 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 SV2AQ7L0J3 742 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 IRF2BP1Q8IU81 584 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 RIN2Q8WYP3 895 aaPredicted RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 NSUN3Q9H649 340 aaKnown RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 LMCD1Q9NZU5 365 aa19.95■□□□□ 0.78
CDX4-201ENST00000373514 MTCL1Q9Y4B5 1905 aaKnown RBP19.95■□□□□ 0.78
CDX4-201ENST00000373514 M0QZQ0 153 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 PHACTR2O75167 634 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 LRRN2O75325 713 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 CXCL14O95715 111 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 MYL6P60660 151 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 RBP5P82980 135 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 ELAVL2Q12926 359 aaKnown RBP19.94■□□□□ 0.78
CDX4-201ENST00000373514 ZACNQ401N2 412 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 KIAA0319Q5VV43 1072 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 DSTYKQ6XUX3 929 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 FRMD5Q7Z6J6 570 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 GLYCTKQ8IVS8 523 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 PPM1EQ8WY54 764 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 SENP8Q96LD8 212 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 TTPALQ9BTX7 342 aa19.94■□□□□ 0.78
CDX4-201ENST00000373514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDX4-201ENST00000373514 PER2O15055 1255 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 PIK3CAP42336 1068 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 MCCD1P59942 119 aaPredicted RBP19.93■□□□□ 0.78
CDX4-201ENST00000373514 RBM10P98175 930 aaKnown RBP19.93■□□□□ 0.78
CDX4-201ENST00000373514 SV2CQ496J9 727 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 CBWD6Q4V339 395 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 CBWD3Q5JTY5 395 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 CBWD5Q5RIA9 395 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 KIAA1841Q6NSI8 718 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 USP37Q86T82 979 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 CREBRFQ8IUR6 639 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 LRRC52Q8N7C0 313 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 HSD3B7Q9H2F3 369 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
CDX4-201ENST00000373514 MRPL17Q9NRX2 175 aaKnown RBP19.93■□□□□ 0.78
CDX4-201ENST00000373514 SAMSN1Q9NSI8 373 aaKnown RBP19.93■□□□□ 0.78
CDX4-201ENST00000373514 PCDHB8Q9UN66 801 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 NFE2L3Q9Y4A8 694 aa19.93■□□□□ 0.78
CDX4-201ENST00000373514 KPNA7A9QM74 516 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 TRAPPC3O43617 180 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 LILRB3O75022 631 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 CLSTN1O94985 981 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 HLA-DRAP01903 254 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 NRIP1P48552 1158 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 MXI1P50539 228 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 AP3M2P53677 418 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 MARSP56192 900 aaKnown RBP19.92■□□□□ 0.78
CDX4-201ENST00000373514 NCOA4Q13772 614 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 PSMD5Q16401 504 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 TRIM59Q8IWR1 403 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 MRPL43Q8N983 215 aaKnown RBP19.92■□□□□ 0.78
CDX4-201ENST00000373514 TAS1R2Q8TE23 839 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 HPDLQ96IR7 371 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 PI4K2AQ9BTU6 479 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 XYLT2Q9H1B5 865 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 THAP9Q9H5L6 903 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 METTL14Q9HCE5 456 aaKnown RBP19.92■□□□□ 0.78
CDX4-201ENST00000373514 TMEM8AQ9HCN3 771 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 FANCLQ9NW38 375 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 ADCY5O95622 1261 aa19.92■□□□□ 0.78
CDX4-201ENST00000373514 CNPP09543 421 aaKnown RBP19.92■□□□□ 0.78
CDX4-201ENST00000373514 PNPLA4P41247 253 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms