RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 KAT5Q92993 513 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 RBM15Q96T37 977 aaKnown RBP eCLIP11.54□□□□□ -0.56
LCN2-202ENST00000372998 RMDN3Q96TC7 470 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 PDCD2LQ9BRP1 358 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 FGFR1OP2Q9NVK5 253 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 NAALADL1Q9UQQ1 740 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
LCN2-202ENST00000372998 TCRBV7S2A1N4TA0A589 114 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 HLA-DRAP01903 254 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 ITGAVP06756 1048 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
LCN2-202ENST00000372998 RALAP11233 206 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 TNNI1P19237 187 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 RRM1P23921 792 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 GNA15P30679 374 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 NAMPTP43490 491 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 CCNG1P51959 295 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 POLGP54098 1239 aaPredicted RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 NOMO3P69849 1222 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 SEPT7Q16181 437 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 PDK4Q16654 411 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 POLNQ7Z5Q5 900 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 NIPA2Q8N8Q9 360 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 LRRC8CQ8TDW0 803 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 N4BP2L2Q92802 583 aaPredicted RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 AGBL1Q96MI9 1066 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 GMLQ99445 158 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 CGRRF1Q99675 332 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 FRMD8Q9BZ67 464 aaPredicted RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 SAR1AQ9NR31 198 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 CHST7Q9NS84 486 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 ARHGAP28Q9P2N2 729 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
LCN2-202ENST00000372998 PCDHB4Q9Y5E5 795 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 BRWD3Q6RI45 1802 aa11.53□□□□□ -0.56
LCN2-202ENST00000372998 ALOX15BO15296 676 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 TM9SF1O15321 606 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 TLR3O15455 904 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 LIASO43766 372 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 SPAG6O75602 509 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 UNC5CO95185 931 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 KLRC2P26717 231 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 CHKAP35790 457 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 RFC5P40937 340 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 MSH2P43246 934 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 ACAP1Q15027 740 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 HADHQ16836 314 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 CCDC38Q502W7 563 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 CMPK2Q5EBM0 449 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 WASHC2DQ5SRD0 308 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 HHATQ5VTY9 493 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 NSMFQ6X4W1 530 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 ASRGL1Q7L266 308 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 TRABD2AQ86V40 505 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 VSIG10LQ86VR7 867 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 SRRM1Q8IYB3 904 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 UHMK1Q8TAS1 419 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 NSUN6Q8TEA1 469 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 MAML1Q92585 1016 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 BTBD6Q96KE9 485 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 LRRC37BQ96QE4 947 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 ZNF341Q9BYN7 854 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 FAM124BQ9H5Z6 455 aaPredicted RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 PDLIM7Q9NR12 457 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 ABCF3Q9NUQ8 709 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 EURLQ9NYK6 297 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 PSMC3IPQ9P2W1 217 aaPredicted RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 ZNF148Q9UQR1 794 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 C15orf41Q9Y2V0 281 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.57
LCN2-202ENST00000372998 MYH9P35579 1960 aaKnown RBP11.52□□□□□ -0.57
LCN2-202ENST00000372998 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
LCN2-202ENST00000372998 TISP43B9A030 160 aa11.51□□□□□ -0.57
LCN2-202ENST00000372998 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
LCN2-202ENST00000372998 NFIBO00712 420 aa11.51□□□□□ -0.57
LCN2-202ENST00000372998 ABLIM1O14639 778 aa11.51□□□□□ -0.57
LCN2-202ENST00000372998 MED7O43513 233 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms