RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 EIF3EP60228 445 aaKnown RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 TMPRSS15P98073 1019 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 GRAMD1BQ3KR37 738 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 FASTKD1Q53R41 847 aaKnown RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 MCEEQ96PE7 176 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 GRID2IPA4D2P6 1211 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 SEC24DO94855 1032 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 HLA-DRAP01903 254 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 VCAM1P19320 739 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 NPEPPSP55786 919 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 DEFB128Q7Z7B8 93 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 TRIM4Q9C037 500 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 ADA2Q9NZK5 511 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 EHD2Q9NZN4 543 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 RHOBTB3O94955 611 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 SLC1A1P43005 524 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 PPM1NQ8N819 430 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 GMCL1P1Q8NEA9 526 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 NT5C1AQ9BXI3 368 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 EEF2KO00418 725 aaKnown RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 GPR182O15218 404 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 KCNN4O15554 427 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 SLC37A4O43826 429 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 CHRNA3P32297 505 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 ALDH7A1P49419 539 aaKnown RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 PMS2P54278 862 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 AMHR2Q16671 573 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 MMS22LQ6ZRQ5 1243 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 ZBED8Q8IZ13 594 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 TRIM45Q9H8W5 580 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 PCDHB8Q9UN66 801 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 PDHXO00330 501 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 CTIFO43310 598 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 MYO1DO94832 1006 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ENDOD1O94919 500 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 STAG3L1P0CL83 205 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 NR1D1P20393 614 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 DNAJB2P25686 324 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 RPA1P27694 616 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ALFQ53S48 1182 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ADSSL1Q8N142 457 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 SENP7Q9BQF6 1050 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TRIM15Q9C019 465 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ALG13Q9NP73 1137 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 GTF2A1LQ9UNN4 478 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 LRG1P02750 347 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 WEE2P0C1S8 567 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 IL1R1P14778 569 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TBL3Q12788 808 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 KLHL29Q96CT2 875 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 APOL5Q9BWW9 433 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ZC4H2Q9NQZ6 224 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TMEM161AQ9NX61 479 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 LIMA1Q9UHB6 759 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 PNMA8BQ9ULN7 279 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 RASA4BC9J798 803 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 RASA4O43374 803 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 DIAPH2O60879 1101 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 DDX5P17844 614 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 PMS1P54277 932 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ARHGAP15Q53QZ3 475 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 CCDC137Q6PK04 289 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 SLC7A14Q8TBB6 771 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ASAP3Q8TDY4 903 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 DPP3Q9NY33 737 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 STX18Q9P2W9 335 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 HDAC6Q9UBN7 1215 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 SLC25A13Q9UJS0 675 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 A0A087WUV0 522 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 GRAP2O75791 330 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ODC1P11926 461 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 VEGFAP15692 232 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 PCSK1P29120 753 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TWF1Q12792 350 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ZNF484Q5JVG2 852 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 RCOR2Q8IZ40 523 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TMEM8AQ9HCN3 771 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 CHCHD3Q9NX63 227 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 WARS2Q9UGM6 360 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 TMEM131LA2VDJ0 1609 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 P4HA2O15460 535 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ITGB3P05106 788 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 SKIP12755 728 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 MZF1P28698 734 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A6-202ENST00000372216 ANGPT1Q15389 498 aa10.28□□□□□ -0.76
COL4A6-202ENST00000372216 MEI1Q5TIA1 1274 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms