RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 FAM124BQ9H5Z6 455 aaPredicted RBP28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 L2HGDHQ9H9P8 463 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 SALL4Q9UJQ4 1053 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 SMIM28A0A1B0GU29 152 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 ANKRD62A6NC57 917 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CD4P01730 458 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CKBP12277 381 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CCL5P13501 91 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CD52P31358 61 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 GUCY2FP51841 1108 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 PCDHB18PQ96TA0 734 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 RNF208Q9H0X6 261 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CXCL16Q9H2A7 254 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CYP3A43Q9HB55 503 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 WEE2P0C1S8 567 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 CD58P19256 250 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 GNA15P30679 374 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 TUBB2AQ13885 445 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 MTFR1Q15390 333 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 SCARA5Q6ZMJ2 495 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 TUBB2BQ9BVA1 445 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 TRAIPQ9BWF2 469 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 TAS2R14Q9NYV8 317 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 KLK14Q9P0G3 267 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 OGDHLQ9ULD0 1010 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 POLIQ9UNA4 740 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 CAPN6Q9Y6Q1 641 aa28.12■■■□□ 2.09
ATPAF1-202ENST00000371937 TLR3O15455 904 aaKnown RBP28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 FTLP02792 175 aaPredicted RBP28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 RAB27AP51159 221 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 GLRA4Q5JXX5 417 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 TRIP11Q15643 1979 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 ANO9A1A5B4 782 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 BUB1O43683 1085 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 ITGA4P13612 1032 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 CDK7P50613 346 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 TTC39CQ8N584 583 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 LRRC52Q8N7C0 313 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 TUBGCP4Q9UGJ1 667 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 JRKLQ9Y4A0 524 aa28.11■■■□□ 2.09
ATPAF1-202ENST00000371937 MYCP01106 439 aaPredicted RBP28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 CYP3A5P20815 502 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 TNNC1P63316 161 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 TRIM72Q6ZMU5 477 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 DNAAF5Q86Y56 855 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 MYRIPQ8NFW9 859 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 CAGE1Q8TC20 777 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 C18orf25Q96B23 403 aaPredicted RBP28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 PDCL3Q9H2J4 239 aa28.1■■■□□ 2.09
ATPAF1-202ENST00000371937 ATF7P17544 494 aaPredicted RBP28.09■■■□□ 2.09
ATPAF1-202ENST00000371937 TMEM130Q8N3G9 435 aa28.09■■■□□ 2.09
ATPAF1-202ENST00000371937 ZNF623O75123 536 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 ABCB4P21439 1286 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 NOP2P46087 812 aaKnown RBP28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 C1QTNF8P60827 252 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 CLEC16AQ2KHT3 1053 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 MRPL10Q7Z7H8 261 aaKnown RBP28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 PCDHGC5Q9Y5F6 944 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 THAP12O43422 761 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 DSC3Q14574 896 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 C9orf57Q5W0N0 161 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 RFFLQ8WZ73 363 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 OSBPL7Q9BZF2 842 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 GIT1Q9Y2X7 761 aa28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.08■■■□□ 2.09
ATPAF1-202ENST00000371937 NCANO14594 1321 aa28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 PDCD11Q14690 1871 aaKnown RBP28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 SKIP12755 728 aa28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 ACAD10Q6JQN1 1059 aa28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 PPP1R2P3Q6NXS1 205 aa28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 THAP2Q9H0W7 228 aa28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 PUF60Q9UHX1 559 aaKnown RBP28.07■■■□□ 2.08
ATPAF1-202ENST00000371937 CALCAP01258 141 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 PNPLA4P41247 253 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 GPC5P78333 572 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 ZNF606Q8WXB4 792 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 CALR3Q96L12 384 aaKnown RBP28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 SMYD3Q9H7B4 428 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 SLC38A7Q9NVC3 462 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 MRFAP1Q9Y605 127 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 A0A0U1RQF3 1178 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 PAEPP09466 180 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 UNGP13051 313 aaPredicted RBP28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 RAP1GAPP47736 663 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 ZNF394Q53GI3 561 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 PAPD7Q5XG87 772 aaKnown RBP28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 TRAF7Q6Q0C0 670 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 RHOT2Q8IXI1 618 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 FAM126BQ8IXS8 530 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 ZNF560Q96MR9 790 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 MMS19Q96T76 1030 aa28.06■■■□□ 2.08
ATPAF1-202ENST00000371937 PIRO00625 290 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 ENC1O14682 589 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 PALMO75781 387 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 CYP1A1P04798 512 aaPredicted RBP28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 CDH8P55286 799 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 BFSP2Q13515 415 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 SLC35G2Q8TBE7 412 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 RPS6KC1Q96S38 1066 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 ADAM2Q99965 735 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms