RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 DPCR1Q3MIW9 517 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 GLYCTKQ8IVS8 523 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 EFHBQ8N7U6 833 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 MLKLQ8NB16 471 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 APPL2Q8NEU8 664 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 PLEKHO2Q8TD55 490 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 PARD3BQ8TEW8 1205 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 HLA-CQ95604 372 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 MKNK1Q9BUB5 465 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 UBE2ZQ9H832 354 aaPredicted RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 THEGQ9P2T0 379 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 M0QZQ0 153 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 SPTLC1O15269 473 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TEX28O15482 410 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 LINC01565O15544 149 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 SLC34A2O95436 690 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TRIM49P0CI25 452 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TRIM49CP0CI26 452 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 RPL17P18621 184 aaKnown RBP15.99■□□□□ 0.15
COL9A1-204ENST00000370496 NLRP12P59046 1061 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TRPC3Q13507 836 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 ZNF280DQ6N043 979 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 PPFIBP1Q86W92 1011 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 GPR65Q8IYL9 337 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 TMC2Q8TDI7 906 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 SENP8Q96LD8 212 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 KLHL5Q96PQ7 755 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-204ENST00000370496 SIX4Q9UIU6 781 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 COG5Q9UP83 839 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
COL9A1-204ENST00000370496 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 H7C4K7 107 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 LILRB3O75022 631 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 TBX10O75333 385 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 KCNA5P22460 613 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 DLG4P78352 724 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 YWHAHQ04917 246 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 DCAF17Q5H9S7 520 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 TCERG1LQ5VWI1 586 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 FOXR2Q6PJQ5 311 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 SASS6Q6UVJ0 657 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 ZC3H3Q8IXZ2 948 aaKnown RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 CASP10Q92851 521 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 CEP63Q96MT8 703 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 MMRN2Q9H8L6 949 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 RXFP1Q9HBX9 757 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 PRDM6Q9NQX0 595 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 FNIP2Q9P278 1114 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 RWDD2AQ9UIY3 292 aa15.98■□□□□ 0.15
COL9A1-204ENST00000370496 BARX2Q9UMQ3 279 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 TIMM13Q9Y5L4 95 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-204ENST00000370496 GLP2RO95838 553 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 GLUD1P00367 558 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 PIK3CAP42336 1068 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 CLDN10P78369 228 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 RBM10P98175 930 aaKnown RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 CTXN3Q4LDR2 81 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 TDRD10Q5VZ19 366 aaKnown RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 ELMSAN1Q6PJG2 1045 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 VN1R2Q8NFZ6 395 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 CXorf38Q8TB03 319 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 LNX1Q8TBB1 728 aaPredicted RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 HPDLQ96IR7 371 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 DUSP9Q99956 384 aaKnown RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 TMEM63CQ9P1W3 806 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 ARMCX3Q9UH62 379 aaPredicted RBP15.97■□□□□ 0.15
COL9A1-204ENST00000370496 DSEQ9UL01 958 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 CDY1Q9Y6F8 540 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 PRUNE2Q8WUY3 3088 aa15.97■□□□□ 0.15
COL9A1-204ENST00000370496 CYB561D2O14569 222 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 STX10O60499 249 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 HUS1O60921 280 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
COL9A1-204ENST00000370496 EPCAMP16422 314 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 TYMPP19971 482 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 GCLMP48507 274 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 CLCN4P51793 760 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 ENPEPQ07075 957 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 ADAM15Q13444 863 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 COL19A1Q14993 1142 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 TPD52L1Q16890 204 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-204ENST00000370496 CTC1Q2NKJ3 1217 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 OVOS1Q6IE37 1185 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 METTL23Q86XA0 190 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 ZNF516Q92618 1163 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 DZANK1Q9NVP4 752 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 SNX9Q9Y5X1 595 aa15.96■□□□□ 0.15
COL9A1-204ENST00000370496 BACE2Q9Y5Z0 518 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms