RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 SSU72Q9NP77 194 aaKnown RBP18.59■□□□□ 0.57
CHUK-201ENST00000370397 SAR1AQ9NR31 198 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 PROSCO94903 275 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 UBXN2AP68543 259 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 ALCAMQ13740 583 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 CCDC125Q86Z20 511 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 CCDC89Q8N998 374 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 ZNF75CPQ92670 426 aaPredicted RBP18.59■□□□□ 0.57
CHUK-201ENST00000370397 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
CHUK-201ENST00000370397 SMG5Q9UPR3 1016 aaKnown RBP18.59■□□□□ 0.57
CHUK-201ENST00000370397 CFHP08603 1231 aa18.58■□□□□ 0.57
CHUK-201ENST00000370397 RARRES1P49788 294 aa18.58■□□□□ 0.57
CHUK-201ENST00000370397 GPX6P59796 221 aa18.58■□□□□ 0.57
CHUK-201ENST00000370397 DCLRE1BQ9H816 532 aa18.58■□□□□ 0.57
CHUK-201ENST00000370397 DNALI1O14645 258 aaPredicted RBP18.58■□□□□ 0.56
CHUK-201ENST00000370397 PECAM1P16284 738 aaPredicted RBP18.58■□□□□ 0.56
CHUK-201ENST00000370397 ITGB5P18084 799 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 SETDB1Q15047 1291 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 SNRNP35Q16560 246 aaKnown RBP18.58■□□□□ 0.56
CHUK-201ENST00000370397 C2CD6Q53TS8 623 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 ZNF449Q6P9G9 518 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 C15orf39Q6ZRI6 1047 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 C4orf33Q8N1A6 199 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 ZNF398Q8TD17 642 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 PRR11Q96HE9 360 aaPredicted RBP18.58■□□□□ 0.56
CHUK-201ENST00000370397 PLVAPQ9BX97 442 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 ARHGEF4Q9NR80 690 aa18.58■□□□□ 0.56
CHUK-201ENST00000370397 PSTPIP1O43586 416 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 LIASO43766 372 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 GDF11O95390 407 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 CYP4F22Q6NT55 531 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 DRICH1Q6PGQ1 229 aaPredicted RBP18.57■□□□□ 0.56
CHUK-201ENST00000370397 NLRP9Q7RTR0 991 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 DNAJC9Q8WXX5 260 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ZNF577Q9BSK1 485 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 TMEM8AQ9HCN3 771 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 EXOC1LA0A1B0GW35 172 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 SMAPO00193 183 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 RIMBP2O15034 1052 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 GYS1P13807 737 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 SNRPFP62306 86 aaKnown RBP18.57■□□□□ 0.56
CHUK-201ENST00000370397 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 CWF19L1Q69YN2 538 aaKnown RBP18.57■□□□□ 0.56
CHUK-201ENST00000370397 KRT39Q6A163 491 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 EGFL6Q8IUX8 553 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 RFWD2Q8NHY2 731 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 MFSD14AQ96MC6 490 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 PI4KBQ9UBF8 816 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
CHUK-201ENST00000370397 CLUHO75153 1309 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 GOLGA8IPA6NC78 632 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 GOLGA8JA6NMD2 632 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ZBED4O75132 1171 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ZSCAN5DPP0CG00 497 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 CRKP46108 304 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 OCRLQ01968 901 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ACSBG2Q5FVE4 666 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 TRAPPC3LQ5T215 181 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 MTDHQ86UE4 582 aaKnown RBP18.57■□□□□ 0.56
CHUK-201ENST00000370397 BBOF1Q8ND07 529 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ZHX2Q9Y6X8 837 aa18.57■□□□□ 0.56
CHUK-201ENST00000370397 ARHGEF35A5YM69 484 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 TCF4P15884 667 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 RNASEH2BQ5TBB1 312 aaKnown RBP18.56■□□□□ 0.56
CHUK-201ENST00000370397 HAUS6Q7Z4H7 955 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 APLFQ8IW19 511 aaPredicted RBP18.56■□□□□ 0.56
CHUK-201ENST00000370397 PTPRN2Q92932 1015 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 TEKT1Q969V4 418 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 SKA1Q96BD8 255 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 OSBPL8Q9BZF1 889 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHUK-201ENST00000370397 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.56■□□□□ 0.56
CHUK-201ENST00000370397 ALOX15BO15296 676 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 PDHA1P08559 390 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 DSG3P32926 999 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 EFHC2Q5JST6 749 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 CPA5Q8WXQ8 436 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 H0Y3Z8 333 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 IPO5O00410 1097 aaKnown RBP18.56■□□□□ 0.56
CHUK-201ENST00000370397 ETS1P14921 441 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 MARK3P27448 753 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 GCNT1Q02742 428 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 TCP10Q12799 353 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 GALNT15Q8N3T1 639 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 ZFAND2BQ8WV99 257 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 CFAP57Q96MR6 1250 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 RAB20Q9NX57 234 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 DNPEPQ9ULA0 475 aa18.56■□□□□ 0.56
CHUK-201ENST00000370397 KBTBD2Q8IY47 623 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 GATA6Q92908 595 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 FAM84AQ96KN4 292 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 DEFB129Q9H1M3 183 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 SAYSD1Q9NPB0 183 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 ARL8BQ9NVJ2 186 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 SENP1Q9P0U3 644 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 LARSQ9P2J5 1176 aaKnown RBP18.55■□□□□ 0.56
CHUK-201ENST00000370397 WDR35Q9P2L0 1181 aa18.55■□□□□ 0.56
CHUK-201ENST00000370397 TMEM150BA6NC51 233 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms