RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 CUL3Q13618 768 aa8.98□□□□□ -0.97
ABCA4-201ENST00000370225 KRT72Q14CN4 511 aa8.98□□□□□ -0.97
ABCA4-201ENST00000370225 SMAD5Q99717 465 aaKnown RBP8.98□□□□□ -0.97
ABCA4-201ENST00000370225 C20orf96Q9NUD7 363 aaPredicted RBP8.98□□□□□ -0.97
ABCA4-201ENST00000370225 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
ABCA4-201ENST00000370225 ENTPD3O75355 529 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 LMNAP02545 664 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 TAL1P17542 331 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CAV1Q03135 178 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 HHIPL2Q6UWX4 724 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF34Q8IZ26 560 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CARNMT1Q8N4J0 409 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 WDR19Q8NEZ3 1342 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 TECPR2O15040 1411 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 C5orf58C9J3I9 102 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 RASA1P20936 1047 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MTF1Q14872 753 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 GJB7Q6PEY0 223 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 GUF1Q8N442 669 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 JMJD4Q9H9V9 463 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 PJA2O43164 708 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 PFDN1O60925 122 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 RPS6P62753 249 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 GPAT2Q6NUI2 795 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 RNPC3Q96LT9 517 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 IGFLR1Q9H665 355 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 STX18Q9P2W9 335 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 FZD1Q9UP38 647 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 HLA-DRAP01903 254 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 FMO5P49326 533 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 SCFD2Q8WU76 684 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 OPTNQ96CV9 577 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 TMEM169Q96HH4 297 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 TMEM161AQ9NX61 479 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 DPP3Q9NY33 737 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 USP27XA6NNY8 438 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MBL2P11226 248 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 USP10Q14694 798 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 RFFLQ8WZ73 363 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 PHF20Q9BVI0 1012 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 SCOCQ9UIL1 159 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 FBXO2Q9UK22 296 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF609O15014 1411 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MYMKA6NI61 221 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 PDXKO00764 312 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 SPTLC1O15269 473 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 NPM3O75607 178 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 NTSR2O95665 410 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 GUCY2CP25092 1073 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 BTKQ06187 659 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 ORC2Q13416 577 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CDC42BPAQ5VT25 1732 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MIB1Q86YT6 1006 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CINPQ9BW66 212 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CACNA2D2Q9NY47 1150 aa8.97□□□□□ -0.97
ABCA4-201ENST00000370225 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 LIMA1Q9UHB6 759 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 MRPL42Q9Y6G3 142 aaKnown RBP8.97□□□□□ -0.97
ABCA4-201ENST00000370225 CSDE1O75534 798 aaKnown RBP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 MAP3K6O95382 1288 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 ODC1P11926 461 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 AVPR1AP37288 418 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 RFC5P40937 340 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 PRMT6Q96LA8 375 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 TARS2Q9BW92 718 aaKnown RBP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 MARCOQ9UEW3 520 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 MYO1GB0I1T2 1018 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 MAP3K13O43283 966 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 HBP1O60381 514 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 IL18RAPO95256 599 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 PYGBP11216 843 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 NT5C2P49902 561 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 ARFIP2P53365 341 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 RCOR2Q8IZ40 523 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 CHST13Q8NET6 341 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 FAM136AQ96C01 138 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 SLITRK1Q96PX8 696 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 TASP1Q9H6P5 420 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 VCAM1P19320 739 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 CHRM3P20309 590 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 PLEKHH3Q7Z736 793 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 TRIM51Q9BSJ1 452 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 NYAP2Q9P242 653 aa8.96□□□□□ -0.97
ABCA4-201ENST00000370225 PNMA8BQ9ULN7 279 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-201ENST00000370225 LRRC7Q96NW7 1537 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 B3GAT3O94766 335 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 NBPF9Q3BBW0 867 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 C6orf10Q5SRN2 563 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 EMBQ6PCB8 327 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 FBXO38Q6PIJ6 1188 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 CNPY4Q8N129 248 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms