RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MMEP08473 750 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP2B6P20813 491 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ACADSBP45954 432 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC12A2P55011 1212 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BCAR1P56945 870 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SV2CQ496J9 727 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CBWD6Q4V339 395 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP6R3Q5H9R7 873 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CBWD3Q5JTY5 395 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CBWD5Q5RIA9 395 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BEND6Q5SZJ8 279 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CELF3Q5SZQ8 465 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 LBX2Q6XYB7 198 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TRMT10CQ7L0Y3 403 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 NT5DC4Q86YG4 428 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC13A5Q86YT5 568 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 JAMLQ86YT9 394 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CCDC110Q8TBZ0 833 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 LRRC8CQ8TDW0 803 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 RNF139Q8WU17 664 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SHISA4Q96DD7 197 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PGBD4Q96DM1 585 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PNKPQ96T60 521 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ASB7Q9H672 318 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 HPCAL4Q9UM19 191 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TTLL3Q9Y4R7 772 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 GLI3P10071 1580 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM150BA6NC51 233 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MANSC4A6NHS7 340 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 WEE2P0C1S8 567 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 INSRRP14616 1297 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MRPS9P82933 396 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 IFRD2Q12894 506 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CLEC16AQ2KHT3 1053 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BBS9Q3SYG4 887 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CDKL3Q8IVW4 592 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BBS5Q8N3I7 341 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CCDC197Q8NCU1 140 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 URGCPQ8TCY9 931 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 AFG1LQ8WV93 481 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 C1orf54Q8WWF1 131 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MED15Q96RN5 788 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 POP1Q99575 1024 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TLR10Q9BXR5 811 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MTMR12Q9C0I1 747 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SAYSD1Q9NPB0 183 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF541Q9H0D2 1346 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 LRRIQ3A6PVS8 624 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ADAMTS3O15072 1205 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 MAFO75444 373 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 STAG3L1P0CL83 205 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP2C8P10632 490 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 VDRP11473 427 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 PDGFRAP16234 1089 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ADORA2AP29274 412 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ICAM3P32942 547 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CDH6P55285 790 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 KLHL38Q2WGJ6 581 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ANKRD20A3Q5VUR7 823 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 IZUMO3Q5VZ72 239 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 IQSEC1Q6DN90 963 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ANO5Q75V66 913 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 EPM2AIP1Q7L775 607 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF410Q86VK4 478 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SIAH1Q8IUQ4 282 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ABRAQ8N0Z2 381 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 LENG9Q96B70 501 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 TBC1D31Q96DN5 1066 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 MCEEQ96PE7 176 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 FRMD8P1Q9BZ68 369 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 AVENQ9NQS1 362 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 DPP3Q9NY33 737 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 XIRP1Q702N8 1843 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SCN7AQ01118 1682 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 NAV1Q8NEY1 1877 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 IQANK1A0A1B0GTG1 560 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 C17orf102A2RUQ5 167 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CFAP69A5D8W1 941 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ANKRD63C9JTQ0 380 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 EPHB6O15197 1021 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ATMINO43313 823 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 MT-ND3P03897 115 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ITGB3P05106 788 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 RARBP10826 455 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 FECHP22830 423 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SLCO1A2P46721 670 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SOX10P56693 466 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 COG7P83436 770 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ROR1Q01973 937 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP3CAQ08209 521 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC20A2Q08357 652 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 GPS1Q13098 491 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 BYSLQ13895 437 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 TMED2Q15363 201 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms