RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 CMTM5Q96DZ9 223 aa16.5■□□□□ 0.23
PRDM1-203ENST00000369096 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
PRDM1-203ENST00000369096 IMPAD1Q9NX62 359 aa16.5■□□□□ 0.23
PRDM1-203ENST00000369096 LINC00854A0A1B0GVQ3 168 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SUPT3HB4E1H0 165 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 GRAPQ13588 217 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 EPN3Q9H201 632 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TRPC7Q9HCX4 862 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 FEM1BQ9UK73 627 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ZNF189O75820 626 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 KLHL2O95198 593 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ALDH1A1P00352 501 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 HMBSP08397 361 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ATP6V1B1P15313 513 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SCFD2Q8WU76 684 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CNDP1Q96KN2 507 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SPATA33Q96N06 139 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TRIM51Q9BSJ1 452 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CAAP1Q9H8G2 361 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 GID8Q9NWU2 228 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 DBR1Q9UK59 544 aaKnown RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TPST1O60507 370 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SLC1A1P43005 524 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 PLA2G4AP47712 749 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TRIP4Q15650 581 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 KLF6Q99612 283 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 DLGAP3O95886 979 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 RGS7P49802 495 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 AP3M2P53677 418 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 KCNK10P57789 538 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TRIM16LQ309B1 348 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 PTRHD1Q6GMV3 140 aaKnown RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ATPAF2Q8N5M1 289 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 HES6Q96HZ4 224 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 NDEL1Q9GZM8 345 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 PSMC3IPQ9P2W1 217 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CDYLQ9Y232 598 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 CLASP2O75122 1294 aaKnown RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ALBP02768 609 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SERPINB9P50453 376 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 ZNF200P98182 395 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SPATA2LQ8IUW3 424 aaPredicted RBP16.49■□□□□ 0.23
PRDM1-203ENST00000369096 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 SPASTQ9UBP0 616 aa16.49■□□□□ 0.23
PRDM1-203ENST00000369096 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 F8W810 466 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RGS4P49798 205 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 ARHGEF7Q14155 803 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 PCSK7Q16549 785 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 CCDC60Q8IWA6 550 aaPredicted RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SEPT3Q9UH03 358 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 LRRIQ3A6PVS8 624 aaPredicted RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 GRK2P25098 689 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 KIF2BQ8N4N8 673 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 CHMP2BQ9UQN3 213 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RTN2O75298 545 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 PYGMP11217 842 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SPP2Q13103 211 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RCOR2Q8IZ40 523 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 FMR1NBQ8N0W7 255 aaPredicted RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RNF149Q8NC42 400 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 APOL5Q9BWW9 433 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SMARCAD1Q9H4L7 1026 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 LSM7Q9UK45 103 aaKnown RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 NEU2Q9Y3R4 380 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 IL31Q6EBC2 164 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SLC30A5Q8TAD4 765 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RBBP8Q99708 897 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 XPO7Q9UIA9 1087 aaKnown RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
PRDM1-203ENST00000369096 SNX9Q9Y5X1 595 aa16.48■□□□□ 0.23
PRDM1-203ENST00000369096 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SASH1O94885 1247 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 CYP2C19P33261 490 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 TTC33Q6PID6 262 aaPredicted RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 C11orf96Q7Z7L8 435 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 VPS50Q96JG6 964 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 DEPDC7Q96QD5 511 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 SH3GL1Q99961 368 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 MAP3K20Q9NYL2 800 aaKnown RBP16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PCDHB8Q9UN66 801 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 PGK2P07205 417 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 MCAMP43121 646 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 CRKP46108 304 aa16.47■□□□□ 0.23
PRDM1-203ENST00000369096 TWF1Q12792 350 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms